Gene BamMC406_4872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_4872 
Symbol 
ID6180480 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp2009857 
End bp2010210 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content64% 
IMG OID641684625 
Producthypothetical protein 
Protein accessionYP_001811536 
Protein GI172063885 
COG category[S] Function unknown 
COG ID[COG3111] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00156] conserved hypothetical protein TIGR00156 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0425097 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000313008 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAACATC TGACCAGTAT CCTGGCGGTC GCGCTCGCGG TGCTGCCGGC TGCCGTTTAT 
GCGCAATACA CGGGGCCGTC CGCGCTGACG ACGACCACCG TGAAGGAACT CCTCGCGAAC
GGCAAGGACG ATCAGCACGT GCAACTGCAA GGGCGGATCG TCAAGCACGT CGGCGGCGAG
GACTACGAGT TCGCCGACTC GACCGGCACG ATCCGCGTCG AGATCGACCA CAAGCTGTGG
GCGGCCGGCC AGCCCGTCAG CGACAAGAAC GAAGTGAAGG TGACCGGCGA ATTCGAGCGC
AAATGGTCGG GCCGTGTGAA GGTCGATGCC GACCACGTCG AAGTGCTGCG CTGA
 
Protein sequence
MKHLTSILAV ALAVLPAAVY AQYTGPSALT TTTVKELLAN GKDDQHVQLQ GRIVKHVGGE 
DYEFADSTGT IRVEIDHKLW AAGQPVSDKN EVKVTGEFER KWSGRVKVDA DHVEVLR