| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4871 |
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| Symbol | |
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| ID | 6180966 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 2008941 |
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| End bp | 2009801 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641684624 |
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| Product | RpiR family transcriptional regulator |
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| Protein accession | YP_001811535 |
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| Protein GI | 172063884 |
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| COG category | [K] Transcription |
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| COG ID | [COG1737] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.211871 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00000205236 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCTGCCA ATTTCGATGA ACTCGCGTCC CGTATCCGGG CGCAATTTTC CGAACTGAGC
CCGCAATTCC AGGCGGGCGC TGCATTTTTG CTCGATCATC CCGACGAGGT CGCCACCTCG
TCGATGCGCA AGGTCGCGCA GCGCGCGCAG GTTCAACCCG CGTCGCTCGT GCGGCTCGCG
CAGCAATTCG GTTTCCCCGG CTGGAACGAG CTGCGCGACC TGTGCGTCGC GCGCGTGCGC
ACGCGTCCCG AGCCGCTCAC GCAGCGTGCG CGTTCGCTCG TGCGGCCCGA CGCGAAGGCG
TCGCTCGCGC ATGACCTGCT CGCTGCCCAG CAACACAATC TCGCCGCCAC CGCCGCGCAG
AACGAGCATG CGCTCGCCGA CGCGGCGAAG CTGATCCGCA AGGCATCGCA CGTGCACGTC
GCCGGATTCC GGTCGTGCTA TCCGGTCGCG TTCGGTTTCG TGTACGGCTA CCGGCTGTTC
CGGCCTACCG TGTCGCTGCT CAACGGCGTC GCCGGCTCGC TCGAAATGGA GTTGCGCACG
ATAGCGAAGC AGAGCGTGAC CGTGATCGTC AGTTTCGCGC CGTATTCGGC GGAAGCGACG
CGCGTGGCGC AGGCGGCGAA GGCGCAGGGC AGCAAGATCG TCGCGATCAC CGACAGCGCG
GTGTCGCCGA TCGCACTGCA CGCGGACGCG CAATTGATCT TCACCCACGA CAGCCCGTCG
TTCTTTCCGT CGCTGGTCGC CGCGCATGCG ATGACCGAAG CGCTGGTCGC ACAGTTGCTC
GCGCTCGAAG GCAGCGATGC GGTCGCGGCG CTCGAGCGCA CCGAAGCGGA ACTGCATGCG
AAGGGCGCGT ATGTCGTGTA G
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| Protein sequence | MAANFDELAS RIRAQFSELS PQFQAGAAFL LDHPDEVATS SMRKVAQRAQ VQPASLVRLA
QQFGFPGWNE LRDLCVARVR TRPEPLTQRA RSLVRPDAKA SLAHDLLAAQ QHNLAATAAQ
NEHALADAAK LIRKASHVHV AGFRSCYPVA FGFVYGYRLF RPTVSLLNGV AGSLEMELRT
IAKQSVTVIV SFAPYSAEAT RVAQAAKAQG SKIVAITDSA VSPIALHADA QLIFTHDSPS
FFPSLVAAHA MTEALVAQLL ALEGSDAVAA LERTEAELHA KGAYVV
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