Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_4868 |
Symbol | |
ID | 6180512 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | - |
Start bp | 2007143 |
End bp | 2007406 |
Gene Length | 264 bp |
Protein Length | 87 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641684622 |
Product | hypothetical protein |
Protein accession | YP_001811533 |
Protein GI | 172063882 |
COG category | [S] Function unknown |
COG ID | [COG5475] Uncharacterized small protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.149916 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.000016911 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACAATCC GAGAAAATCA CCGCGGCTTT CGCGTTGGCG ATGTCGTGAC GCTGAAAACC GGCGGCCCAC GCATGACCGT CACCTATGCC GGGCCGGTCG TGTTCGACGA TGCCGAGTGG CTGATCTGCC AGTGGTTCGA CGAGACCGGC CACTTCCGGC AGGAAATGTT TCACCACGAC ACGGTGGTGG CCGAGCCGCG CGCGATTTCG GCCGGGCGCG TCCGCATGCG CATGCAGGCG TACCGCTACC GGTCGGCGGC CTGA
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Protein sequence | MTIRENHRGF RVGDVVTLKT GGPRMTVTYA GPVVFDDAEW LICQWFDETG HFRQEMFHHD TVVAEPRAIS AGRVRMRMQA YRYRSAA
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