Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_4863 |
Symbol | |
ID | 6179924 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 2003047 |
End bp | 2003847 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641684617 |
Product | hypothetical protein |
Protein accession | YP_001811528 |
Protein GI | 172063877 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.207641 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.000146739 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATCGCCC TCGCATTAAT GGGATGCGGC AACGATACGT CCGTTTCGTC CGCTCAGCCG ACACAGGAAC AAACTGCGCT CGCGGACTTG AACGAAGCGA CCTCCGGCAA ACTGGACGCG CTACTGGCAC TCCGCGCCGC GCATCCGGAC AGCGGCCCCG AACAGCTCAT CGAGACGTTG TCGCGCGAAT TTCTCGGCAC CCCTTATCGA GACGGCATGC TCAAGGGGAC CGCGACCACG CCGGAACAAC TCGTGATCGA CTTCAGCGGA CTCGATTGCT TCACTTATCT CGACTATGTC GAAGCAGCGA GAAAGGCCGT GACAAAAGTC GACTACGCCG ATCGTCTCGT CCGGACGCGC TACGTGAACG GCGACATCGA CTTCCAGCAC CGCCGCCATT TCTTCACGGA CTGGGCCAAC CGGCCGGTGG TGCTGGCCGA TGACGTAACA ACCGCGCTCA GCGCCCGCGC CGTCACGGTC ACGAAGCCAC TCAACAGGAA AGCCGACGGC GGCACGTACG TGCCTGGACT GCCGGTGGTC CGGCGGGACG TCGCTCATAT CCCGAGCGAA TTCGTCGACG ACTATGTCGT CAGCCGGCTT CGGACCGGCG ATTACATCGG CATCTACGCG AAGGCGGACG GCCTCGACGT CACGCACGTC GGCTTCTTCG TCGCGACAAG CGACGGGCCG ATGCTGCGCA ACGCATCGTC GAAGAAGGCC AACATGAAGG TCGTCGATTC GCCGTTTCTC GAGTATGTGA AGAACACGCC GGGCATCGTG GTGCTGAGGC CGCGCGCCTG A
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Protein sequence | MIALALMGCG NDTSVSSAQP TQEQTALADL NEATSGKLDA LLALRAAHPD SGPEQLIETL SREFLGTPYR DGMLKGTATT PEQLVIDFSG LDCFTYLDYV EAARKAVTKV DYADRLVRTR YVNGDIDFQH RRHFFTDWAN RPVVLADDVT TALSARAVTV TKPLNRKADG GTYVPGLPVV RRDVAHIPSE FVDDYVVSRL RTGDYIGIYA KADGLDVTHV GFFVATSDGP MLRNASSKKA NMKVVDSPFL EYVKNTPGIV VLRPRA
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