Gene BamMC406_4860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_4860 
Symbol 
ID6180617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp1997950 
End bp1999476 
Gene Length1527 bp 
Protein Length508 aa 
Translation table11 
GC content68% 
IMG OID641684614 
Productarginine:agmatin antiporter 
Protein accessionYP_001811525 
Protein GI172063874 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0531] Amino acid transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.086172 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.00303215 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCCGATG CCAGCTCGTC CTCCTCCCGC TCCGCCGCCG CGCCGGCCGC GATATCCGCG 
CCGAAAATCG GCGTCGTCCC CGCCACGCTG ATGGTCGCGG GCAACATGAT GGGCTCCGGC
GTCTTCATGC TGCCCGCGAA CCTCGCCGCC ACCGGCGGCA TCGCGATCTT CGGCTGGCTG
ATCACCGTGG TCGGCGCCGT GTCGCTCGCG CTGGTGTTCG CGAAGCTCGC GGCGATCGAC
CCGGCCGCCG GCGGCCCGTA CGCGTACGCG CGCAAATCGT TCGGCCCGTA CATCGGCTAC
CAGACCAACC TGATCTACTG GCTCGCGAAC GTGCTCGGCA ACGTCGGCCT CGCGGTCGCC
GGCCTCGGTT ATCTGACGCA CTTCTTCCCC GTGCTGCGCG ACCCGCTCGT GTTCGCGCTC
GCACAGATCT TCGTGATCTG GCTGTTCACC TACGCAAACA TCCTCGGGCC GAACGTCATC
GGCCGCGTGC AGTCGGTCAC GACGATCTTC GCGCTCGTGC CGATCCTCGG GATGGCCGTG
TTCGGCTGGT TCTGGTTCAG CAAGGACGTG TATTTCGCCG GCTGGAACGT GTCGGGCGCG
AGCAGCTTCA GCGCGATCGG CGCGACGCTG AACTTCACGC TGTGGGCATT CATCGGCGTC
GAGAGCGCGT CGGTGTCGGC CGGCGTCGTC GAGAACCCGT CGCGCAACGT GCCGATCGCA
ACCGTCGGCG GCGTCGTGCT CGCGGCAGTG TGCTACGTGC TCAGCTCGAC CGTGATCATG
GGGATGATCC CGAACAAGGC GCTGCTCGCG TCGAGCGCGC CGTTCGCGGA TGCCGCGCGC
CTCGCGCTCG GCGACACCGC CGCGAACGCG GTCGCGATCT GCGCGGCGCT CGGCTGCCTC
GGCTCGCTCG CCGGCTGGAC GCTGCTGGTC GGCCAGACCG CGAAGGCCGC GGCCGACGAC
GGCCTGTTCG CCGGCGTGTT CGCCCGCGTC AACTCGAAGA ACGTGCCGTC GGCCGGCCTC
GCGATCGTCG CGGTGATCAT GTCCGTGCAG GTGCTCGCGA CGATGTCGCC GAGCGCGAGC
GAGCAGTTCG GCAAGATCGC GTCGATCGCC GTGATCATGA CGCTGTTGCC GTACATCTAC
TCGTGCATCG CGATCAAGGT GCTCGGCTAC GGCAAGATGC CGTCGCACCA GTTCACCTTC
TACACGATCG TCGGCCTGAT CGGCGCCGTC TACGCGCTGT GGGCGATGGT CGGCTCCGAC
GGCCAGCAGA CGCGCTGGTC GCTGATCTTC GTGATCGCGA CGATCGTCTT CTACGAGCTG
TCGATCAACC GCCAGCGCGA AATCGAGGAA ACCCATGTCC ATCCGGGCGG CCGTTCGCCG
CGCTGGGTGC GCTATCTCGC GCTCGGCGTG ACCATCGTCG CGCTCGTCGC CACCTTCTGG
ATCTCGGTAG GCCGACACGA AGCCGACATT CTTCACGCCC GCTCGCCGGC CGCGGGCGTC
CAGGCAACCC AGCAAACGGG GGAATAA
 
Protein sequence
MSDASSSSSR SAAAPAAISA PKIGVVPATL MVAGNMMGSG VFMLPANLAA TGGIAIFGWL 
ITVVGAVSLA LVFAKLAAID PAAGGPYAYA RKSFGPYIGY QTNLIYWLAN VLGNVGLAVA
GLGYLTHFFP VLRDPLVFAL AQIFVIWLFT YANILGPNVI GRVQSVTTIF ALVPILGMAV
FGWFWFSKDV YFAGWNVSGA SSFSAIGATL NFTLWAFIGV ESASVSAGVV ENPSRNVPIA
TVGGVVLAAV CYVLSSTVIM GMIPNKALLA SSAPFADAAR LALGDTAANA VAICAALGCL
GSLAGWTLLV GQTAKAAADD GLFAGVFARV NSKNVPSAGL AIVAVIMSVQ VLATMSPSAS
EQFGKIASIA VIMTLLPYIY SCIAIKVLGY GKMPSHQFTF YTIVGLIGAV YALWAMVGSD
GQQTRWSLIF VIATIVFYEL SINRQREIEE THVHPGGRSP RWVRYLALGV TIVALVATFW
ISVGRHEADI LHARSPAAGV QATQQTGE