Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_4860 |
Symbol | |
ID | 6180617 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 1997950 |
End bp | 1999476 |
Gene Length | 1527 bp |
Protein Length | 508 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641684614 |
Product | arginine:agmatin antiporter |
Protein accession | YP_001811525 |
Protein GI | 172063874 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0531] Amino acid transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.086172 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.00303215 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCCGATG CCAGCTCGTC CTCCTCCCGC TCCGCCGCCG CGCCGGCCGC GATATCCGCG CCGAAAATCG GCGTCGTCCC CGCCACGCTG ATGGTCGCGG GCAACATGAT GGGCTCCGGC GTCTTCATGC TGCCCGCGAA CCTCGCCGCC ACCGGCGGCA TCGCGATCTT CGGCTGGCTG ATCACCGTGG TCGGCGCCGT GTCGCTCGCG CTGGTGTTCG CGAAGCTCGC GGCGATCGAC CCGGCCGCCG GCGGCCCGTA CGCGTACGCG CGCAAATCGT TCGGCCCGTA CATCGGCTAC CAGACCAACC TGATCTACTG GCTCGCGAAC GTGCTCGGCA ACGTCGGCCT CGCGGTCGCC GGCCTCGGTT ATCTGACGCA CTTCTTCCCC GTGCTGCGCG ACCCGCTCGT GTTCGCGCTC GCACAGATCT TCGTGATCTG GCTGTTCACC TACGCAAACA TCCTCGGGCC GAACGTCATC GGCCGCGTGC AGTCGGTCAC GACGATCTTC GCGCTCGTGC CGATCCTCGG GATGGCCGTG TTCGGCTGGT TCTGGTTCAG CAAGGACGTG TATTTCGCCG GCTGGAACGT GTCGGGCGCG AGCAGCTTCA GCGCGATCGG CGCGACGCTG AACTTCACGC TGTGGGCATT CATCGGCGTC GAGAGCGCGT CGGTGTCGGC CGGCGTCGTC GAGAACCCGT CGCGCAACGT GCCGATCGCA ACCGTCGGCG GCGTCGTGCT CGCGGCAGTG TGCTACGTGC TCAGCTCGAC CGTGATCATG GGGATGATCC CGAACAAGGC GCTGCTCGCG TCGAGCGCGC CGTTCGCGGA TGCCGCGCGC CTCGCGCTCG GCGACACCGC CGCGAACGCG GTCGCGATCT GCGCGGCGCT CGGCTGCCTC GGCTCGCTCG CCGGCTGGAC GCTGCTGGTC GGCCAGACCG CGAAGGCCGC GGCCGACGAC GGCCTGTTCG CCGGCGTGTT CGCCCGCGTC AACTCGAAGA ACGTGCCGTC GGCCGGCCTC GCGATCGTCG CGGTGATCAT GTCCGTGCAG GTGCTCGCGA CGATGTCGCC GAGCGCGAGC GAGCAGTTCG GCAAGATCGC GTCGATCGCC GTGATCATGA CGCTGTTGCC GTACATCTAC TCGTGCATCG CGATCAAGGT GCTCGGCTAC GGCAAGATGC CGTCGCACCA GTTCACCTTC TACACGATCG TCGGCCTGAT CGGCGCCGTC TACGCGCTGT GGGCGATGGT CGGCTCCGAC GGCCAGCAGA CGCGCTGGTC GCTGATCTTC GTGATCGCGA CGATCGTCTT CTACGAGCTG TCGATCAACC GCCAGCGCGA AATCGAGGAA ACCCATGTCC ATCCGGGCGG CCGTTCGCCG CGCTGGGTGC GCTATCTCGC GCTCGGCGTG ACCATCGTCG CGCTCGTCGC CACCTTCTGG ATCTCGGTAG GCCGACACGA AGCCGACATT CTTCACGCCC GCTCGCCGGC CGCGGGCGTC CAGGCAACCC AGCAAACGGG GGAATAA
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Protein sequence | MSDASSSSSR SAAAPAAISA PKIGVVPATL MVAGNMMGSG VFMLPANLAA TGGIAIFGWL ITVVGAVSLA LVFAKLAAID PAAGGPYAYA RKSFGPYIGY QTNLIYWLAN VLGNVGLAVA GLGYLTHFFP VLRDPLVFAL AQIFVIWLFT YANILGPNVI GRVQSVTTIF ALVPILGMAV FGWFWFSKDV YFAGWNVSGA SSFSAIGATL NFTLWAFIGV ESASVSAGVV ENPSRNVPIA TVGGVVLAAV CYVLSSTVIM GMIPNKALLA SSAPFADAAR LALGDTAANA VAICAALGCL GSLAGWTLLV GQTAKAAADD GLFAGVFARV NSKNVPSAGL AIVAVIMSVQ VLATMSPSAS EQFGKIASIA VIMTLLPYIY SCIAIKVLGY GKMPSHQFTF YTIVGLIGAV YALWAMVGSD GQQTRWSLIF VIATIVFYEL SINRQREIEE THVHPGGRSP RWVRYLALGV TIVALVATFW ISVGRHEADI LHARSPAAGV QATQQTGE
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