Gene BamMC406_4856 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_4856 
Symbol 
ID6181067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp1993514 
End bp1994092 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content66% 
IMG OID641684610 
ProductNnrU family protein 
Protein accessionYP_001811521 
Protein GI172063870 
COG category[S] Function unknown 
COG ID[COG4094] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.486506 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0137655 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGTCC TGATTCTCGG TTTAGCGATC TTTCTCGGCG TGCATTCGAT CCGGATCGTC 
GCGGATGGCT GGCGCTCCGC AACCATCGAG CGGATCGGAG AGAAACGCTG GAAGGGCCCC
TATGCGATCG CGTCGATCGT CGGCTTCGTG CTGATCATCT GGGGTTACGG GATCGCACGC
CAGAACGGGA CGCTGCTGTG GGTGTCACCC GTCGGCGTGC GCCACCTCAC CGGCATGCTG
ACCGCGATCG CATTCGTGCT GATCGCCGCG GCCTACGTGC CGCGCAACCG CATCAAGACG
CTCGTCGGTC ATCCGATGGT GGCCGGCGTG ATGGTGTGGG CGGTCGCGCA CCTGCTCGCG
AACGGCACGC TGCATGCGGT CGTGCTGTTC GGCGCATTTT TCGTGTGGTC GCTGATCGAT
TTCGTCGTGT GGCGCGCGCG CGATCGCCGC GACGGCGTCC GCTATCCGGC CGGCAGGCTG
TCGGGCGATG CCGTGACGAT CGCGGCCGGG CTCGTCGTAT GGGCCGTTTT CGCGCTGTTC
CTGCACGGGC CGCTGATCGG CGTGCGGCCG TTCGGTTGA
 
Protein sequence
MLVLILGLAI FLGVHSIRIV ADGWRSATIE RIGEKRWKGP YAIASIVGFV LIIWGYGIAR 
QNGTLLWVSP VGVRHLTGML TAIAFVLIAA AYVPRNRIKT LVGHPMVAGV MVWAVAHLLA
NGTLHAVVLF GAFFVWSLID FVVWRARDRR DGVRYPAGRL SGDAVTIAAG LVVWAVFALF
LHGPLIGVRP FG