Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_4856 |
Symbol | |
ID | 6181067 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | - |
Start bp | 1993514 |
End bp | 1994092 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641684610 |
Product | NnrU family protein |
Protein accession | YP_001811521 |
Protein GI | 172063870 |
COG category | [S] Function unknown |
COG ID | [COG4094] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.486506 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0137655 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGTCC TGATTCTCGG TTTAGCGATC TTTCTCGGCG TGCATTCGAT CCGGATCGTC GCGGATGGCT GGCGCTCCGC AACCATCGAG CGGATCGGAG AGAAACGCTG GAAGGGCCCC TATGCGATCG CGTCGATCGT CGGCTTCGTG CTGATCATCT GGGGTTACGG GATCGCACGC CAGAACGGGA CGCTGCTGTG GGTGTCACCC GTCGGCGTGC GCCACCTCAC CGGCATGCTG ACCGCGATCG CATTCGTGCT GATCGCCGCG GCCTACGTGC CGCGCAACCG CATCAAGACG CTCGTCGGTC ATCCGATGGT GGCCGGCGTG ATGGTGTGGG CGGTCGCGCA CCTGCTCGCG AACGGCACGC TGCATGCGGT CGTGCTGTTC GGCGCATTTT TCGTGTGGTC GCTGATCGAT TTCGTCGTGT GGCGCGCGCG CGATCGCCGC GACGGCGTCC GCTATCCGGC CGGCAGGCTG TCGGGCGATG CCGTGACGAT CGCGGCCGGG CTCGTCGTAT GGGCCGTTTT CGCGCTGTTC CTGCACGGGC CGCTGATCGG CGTGCGGCCG TTCGGTTGA
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Protein sequence | MLVLILGLAI FLGVHSIRIV ADGWRSATIE RIGEKRWKGP YAIASIVGFV LIIWGYGIAR QNGTLLWVSP VGVRHLTGML TAIAFVLIAA AYVPRNRIKT LVGHPMVAGV MVWAVAHLLA NGTLHAVVLF GAFFVWSLID FVVWRARDRR DGVRYPAGRL SGDAVTIAAG LVVWAVFALF LHGPLIGVRP FG
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