Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_4854 |
Symbol | |
ID | 6181269 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 1991874 |
End bp | 1992452 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641684608 |
Product | hypothetical protein |
Protein accession | YP_001811519 |
Protein GI | 172063868 |
COG category | [S] Function unknown |
COG ID | [COG5483] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.388946 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0401842 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCTCC CGTTCTACAC GATCGGTCAT TCGAACCGCA CGCTCGACGA GTTCGTCGAG ATGCTCGACG CGGCCGATAT CGCGTTGCTT GCCGATATCC GGAAGATGAC GCGCTCGCGC ACGAATCCGC AGTTCAACGA AGCGACGCTG CCCGACGCGC TGGCCGCCGT CGATATCGCG TACGAGCACA TCGCGGAGCT CGGCGGCCTG CGTGGCAAGT CGCGCGACGT GCCCGACGAG GTCAACGACT TCTGGACCAA CCGCAGCTTC CATCGCTATG CCGACTACGC GCTGTCGCCC GAGTTTCGAG CCGGCCTCGA CCGCTTGATC GAACACGGGC ACCAGCAACG CTGCGCGATC ATGTGTTCGG AAGCCGTGTG GTGGCGGTGT CACCGCCGCA TCGTGTCCGA CTACCTGATC GCGCGCGGCG AAACGGTGCT GCACATCATG GGCCGCAATC GCGCCGAGCC CGCGCGTCTC ACGGCCGGCG CGGTGATCCG GGACGACGGC ACGATCGTCT ATCCGGACGT CGACAGCGAT GCGGCCGACG ACGGCACGGC CGGGCAACCG AACGAGTAA
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Protein sequence | MTLPFYTIGH SNRTLDEFVE MLDAADIALL ADIRKMTRSR TNPQFNEATL PDALAAVDIA YEHIAELGGL RGKSRDVPDE VNDFWTNRSF HRYADYALSP EFRAGLDRLI EHGHQQRCAI MCSEAVWWRC HRRIVSDYLI ARGETVLHIM GRNRAEPARL TAGAVIRDDG TIVYPDVDSD AADDGTAGQP NE
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