| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4845 |
|---|
| Symbol | |
|---|
| ID | 6179842 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010552 |
|---|
| Strand | - |
|---|
| Start bp | 1984821 |
|---|
| End bp | 1985318 |
|---|
| Gene Length | 498 bp |
|---|
| Protein Length | 165 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641684600 |
|---|
| Product | AsnC family transcriptional regulator |
|---|
| Protein accession | YP_001811511 |
|---|
| Protein GI | 172063860 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1522] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.0710224 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGATG CACTCGACTC CTTCGACCGC AAGATCCTGA ATATCGTCCA GCGCGATTGC
ACCGCGACTG CGGATGCCAT CGCCGAACGG ATCGGCCTGT CCACGTCGGC CGTGCAAAAG
CGGCTGAAGC GCATGCGCAC CGAAAAGATC ATTTCGGCGG AAATCGCGGT GGTCGATCGC
GCGGCGGTCG GCAGGCCGAT GACGTTCATC GCGGCAATCG AGATCGAACG CGAAAACTAC
GAGACGGTCG CCAGGTTCCG CGAGTGGTCG AAGGCGCATG ACGAAATCCA GCAGATCTAC
TACGTTACCG GCTCCGTCGA CCTGATCGCG ATCATCACCG CGCACGACGT AGAGGCGTAC
GACCGGCTGT CCGCGCGGAT CATGCAGAGC AACCCGATGA TCCGCCGGAT CAATACGAAC
GTCGTGCTGA GCGCGGTCAA GGTCGGGCTG TTCGTGCCGG TCGACAAGGA CGGCGACGAC
GAACCGTCGG CCACCTGA
|
|---|
| Protein sequence | MTDALDSFDR KILNIVQRDC TATADAIAER IGLSTSAVQK RLKRMRTEKI ISAEIAVVDR
AAVGRPMTFI AAIEIERENY ETVARFREWS KAHDEIQQIY YVTGSVDLIA IITAHDVEAY
DRLSARIMQS NPMIRRINTN VVLSAVKVGL FVPVDKDGDD EPSAT
|
|---|
| |