| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4841 |
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| Symbol | |
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| ID | 6180150 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 1980473 |
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| End bp | 1981252 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641684596 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001811507 |
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| Protein GI | 172063856 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.608491 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.182351 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAAAGC TGCTTCAGTC GCTGTGCGTG GGCGCGGCAT TGCTCGGTTC GGTCGCGCAT
GCCGAGCAGG TCGTGCGGGT CGGCACGCTC GCCGATTACG CGCCGTTCGA ATACAAGGAT
GCATCCGGCA AGCTGCAGGG CATGGAGATC GACATCGGCA AGAAGATGTG CGACACGATG
AAGGTCAAGT GCCAGTGGGT GACGATGGAT TTCGACGCGC TGATTCCGGC ACTCAAGGCG
AAGCAGATCG ATGCGGTGCT CGCGCAAATG TCGAAGACGC CGGAGCGTGA GCAGTCGGTG
GACTTCACGC GCATTTTCAC GACGGCGCCC GTGCAGCTCG TCGCGAAGCA GGGCTCGGGC
ATCACGGACA ACGCCGCCAC GCTGCGCGGC AAGACGATCG GCGTTCAGAC GGCATCGACG
CACGAATCCT ATCTGCGCCG CCGCCTGCCG GCGAGCAAGT CGGGAATCAA CGTGAAGGTC
TATCAGACGC TCGACGAAGC CTGGCTCGAT CTCGAGGCCG GACGCGTCGA TGCGGTGTTT
GCCGACAACA CGGTTGCGTA CGACTGGTTG ACGAAGGCCG GCAGGAAGGA GGGCTTCGAC
TTCGTCGGCA AGCCGATCGC CGATGCGGAG ATCTTCGGCG ACGGCACCGC GATCGCGGTA
CGCAAGGGCG ACGCGCCGTT GAAGGCGCTG TTCGACAAGG GCATCGCGCA GGTGCAGGCG
GACGGCACGT TCGCCGCGGC CAACAAGCGC TATTTCCCGT TCAGCATCGC GCCGCAATAA
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| Protein sequence | MRKLLQSLCV GAALLGSVAH AEQVVRVGTL ADYAPFEYKD ASGKLQGMEI DIGKKMCDTM
KVKCQWVTMD FDALIPALKA KQIDAVLAQM SKTPEREQSV DFTRIFTTAP VQLVAKQGSG
ITDNAATLRG KTIGVQTAST HESYLRRRLP ASKSGINVKV YQTLDEAWLD LEAGRVDAVF
ADNTVAYDWL TKAGRKEGFD FVGKPIADAE IFGDGTAIAV RKGDAPLKAL FDKGIAQVQA
DGTFAAANKR YFPFSIAPQ
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