| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4839 |
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| Symbol | |
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| ID | 6179878 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 1979013 |
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| End bp | 1979708 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641684594 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001811505 |
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| Protein GI | 172063854 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4160] ABC-type arginine/histidine transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.337109 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGACT TTCTTTCCCT CATCGAGCAG TCCGGCCCGG ACGTCGCGCG CGGCATATGG
ATCACGCTCG AGCTGCTGGT GCTGTCATGC ACCCTTGCGT TCGCGCTCGC GGTGCCGCTG
GCTGTCGCGC GCACGTCGGC GTACCGGTGG TTGTCGATAC CGAGCCGCCT GTTCATGTCG
GTGTTTCGCG GCACGCCGCT GCTGGTGCAG ATTTTCGTGC TGTATTACGG GCTCGCGCAG
TTCTCGATCG TGCGTGCGTC GCCTCTGTGG CTGCTGGTCG GCGGATCGTT CTCGTGTGCA
TTGTGCGCGC TGACGCTCAA TCTCGCGGCC TACATGGCGG AAGACATCCG GGGCGGGATC
GCCGGCGTCC CCGTCGGCGA GAAGGAAGCC GCGCTCGCAT TCGGGATGAG CCGCTTCATG
CTCACCTGGT TCGTGATCGT GCCGCGCGCG ATCGGCATCG TCGCACCGAC GCTCGGCAAC
GAGATCGTGC TGCAGCTGAA GTCGACCGCG CTTGCCAGCA CGATCACCGT GCTCGACCTG
ACCGGTGTCG CGCGACGCAT CTCCATCGAA ACCTATACGA CCGACGCGCT GATGCTGGCC
GGCATCGTGT ACGTCGGTAT CACGGCTGTG CTTTCGACCG CGCTCAAACG CGTCGAAGGT
CTGCTGAATC GCCATCTGGG CAGCATGCGT GCCTGA
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| Protein sequence | MNDFLSLIEQ SGPDVARGIW ITLELLVLSC TLAFALAVPL AVARTSAYRW LSIPSRLFMS
VFRGTPLLVQ IFVLYYGLAQ FSIVRASPLW LLVGGSFSCA LCALTLNLAA YMAEDIRGGI
AGVPVGEKEA ALAFGMSRFM LTWFVIVPRA IGIVAPTLGN EIVLQLKSTA LASTITVLDL
TGVARRISIE TYTTDALMLA GIVYVGITAV LSTALKRVEG LLNRHLGSMR A
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