| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4837 |
|---|
| Symbol | |
|---|
| ID | 6180137 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010552 |
|---|
| Strand | - |
|---|
| Start bp | 1976765 |
|---|
| End bp | 1977694 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641684592 |
|---|
| Product | homocysteine S-methyltransferase |
|---|
| Protein accession | YP_001811503 |
|---|
| Protein GI | 172063852 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2040] Homocysteine/selenocysteine methylase (S-methylmethionine-dependent) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.345042 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATGACA TCACGGTACT CGACGGCGGC ATGGGCCGCG AACTGGCGCG GATGGGCGCG
CCGTTCAGAC AGCCGGAATG GTCGGCGCTC GCGCTGATGG AAGCGCCGGA TTACGTCGGC
CTTGCGCACG ACGCATTCAT CGCGGCGGGC GCTGACGTGA TCACCGCGAA CAGCTATGCG
GTCGTGCCGT TCCATATCGG CGAGGAGCGG TTTCGTCGCG ACGGTGTCGC GCTCGCGGCA
CTGGCCGGGC AACTCGCGCG GCAAGCGGCA GACCGCGCGG GGCGGCCCGT GCGCGTCGCA
GGATCGCTTC CACCGACCGG CGGTTCCTAC CGACCCGACC TGTTCGACGC AGCGCGCGCG
GATGCGATCC TGGCGACGCT CGTCGATGGG CTCGATCCAT ACGTCGACCT GTGGCTGGCC
GAGACGCAGA GCCTGACGGA CGAGATCGGC GCGGTCCGGC GTGCGCTCGA TGCGAATCCG
AAGCCGCTTT GGGTCTCGTT CACGCTGCGC GACGACGTCG ACGCAGGCGC CACGCCGGTA
CTGCGATCGG GACAGACGCT CGACGAAGCG ATCGACGCCG CCGTGTCCGC GCGCGCGACC
GCGCTGCTGT TCAACTGCAG CCAGCCGGAA GTGATGGGTG CGGCGATCGA GACGGCGCAG
CGCACGCTCG CGAGAGCGGG AACGTCGCTC GCGATCGGCG CCTATGCGAA CGCGTTTCCG
CCTCAGCGCG CCGATGCGCG CGCGAACGAG GAGCTCGACG GCCTGCGCGG CGACATCGAT
CCGCCCGGCT ATGCAAGATG GGCAGAGCAG TGGCTTGCGC TGGGCGCGCG GATTGTCGGC
GGGTGTTGCG GAATCGGCCC CGGCCACATC GCGGCATTGC GGGACGCGGT CGATGCGCGC
GGCGCCGGGC ACACCGGATT CGGCCAATGA
|
|---|
| Protein sequence | MHDITVLDGG MGRELARMGA PFRQPEWSAL ALMEAPDYVG LAHDAFIAAG ADVITANSYA
VVPFHIGEER FRRDGVALAA LAGQLARQAA DRAGRPVRVA GSLPPTGGSY RPDLFDAARA
DAILATLVDG LDPYVDLWLA ETQSLTDEIG AVRRALDANP KPLWVSFTLR DDVDAGATPV
LRSGQTLDEA IDAAVSARAT ALLFNCSQPE VMGAAIETAQ RTLARAGTSL AIGAYANAFP
PQRADARANE ELDGLRGDID PPGYARWAEQ WLALGARIVG GCCGIGPGHI AALRDAVDAR
GAGHTGFGQ
|
|---|
| |