Gene BamMC406_4831 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_4831 
Symbol 
ID6181442 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp1970561 
End bp1971721 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content64% 
IMG OID641684586 
Producthypothetical protein 
Protein accessionYP_001811497 
Protein GI172063846 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.857401 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.718277 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCGAT ACTTTCCTAC CAACTATGTC TGGAATCTAT CTGTCAATCT CGCCATCGAA 
ATGGGCGCGC GCATCGGCGA AATCGAGGAT ATGTGCGGGC CGCTCCAGGA AGCGGCCAGG
CAGCCGGACG CTGACGGCAC GCGTGCGTTT CGCGAAGCGT GGGTCGAGAA GGCAGATCGC
CTTTGCGATC TCGCGCAGGA CGACGAGGCC CTGGGGCGGC GGCTGTCGGC GGGCGAGAAG
TACAAGCGTG CCGCGATCTA TCTGATTACG GCCGAGCGCA TGCTCGCGCA CGATGCCCCG
GGCCGTCTCG AGCTCTACCG ACGCTCGCTC GATACGTTCG ACAAGGGCAT CGCGCTCTCC
GGCGAGAACT GCGAGCACGT CGCCATTCCG TACGGCGACC AGCATCTGTC CGGACTCCTT
GTGAAAGCGA AGAACGCCGA CGCGCGCAGT CCGCTGCTCG TGCAGGTCAA CGGACTCGAT
TCGACCAAGG AAATGAAGTA CTTCGTGGGC TTGCCGGCAT GGCTGGCCGC GCGCGGCGTA
TCGTCGTTGA TCGTCGACCA GCCCGGTACC GGCGAAGCGT TGCGGCTGCA CGGCCTGAAT
GCGGTATACA ACTCGGAGGT CTGGGCAAGC AAGGTCGTCG ACTGGCTCGA GGGCCGGGAC
GACGTCGATC CGAAGCGGAT CGGCATGGAG GGCGTGTCGC TCGGCGGCTA CTACTGCCCG
CGCGCAGTCG CGTTCGAGCC GCGCTTCGCC TGCGGTGTGG TGTGGGGCGC CAACCACGAC
TGGCGCGACG TCCAGAAAAA GCGCCTGCAG CGCGAAGGCA ACTTCCCGGT GCCGCACTAC
TGGAAGCACG TCTGCTGGGT CTGGGGCGCG AAGGATGTCG ACGACTTCAT GCGCATCGCC
GAAAACGTAC ATCTCGACGG TGTGCTCGAT CGTATCAAGG TGCCGTTTCT CGTCACGCAT
GGCTCGCAGG ACTCGCAGAT CCCGGTTGCC TGGGCTCACC GCACCTACGA GCAACTCGTG
AACAGCCCCA AGCGCGAGCT CAAGATCTTC ACCGAGCGCG AAGGTGGCGT CCAGCATTCG
AGCTTCGACA ACTCGATCAA CGGCGGGCAC TTCATCGCCG ACTGGGTCGC CGAAACGCTC
GGCGGACGCA CCTCGCTCTG A
 
Protein sequence
MFRYFPTNYV WNLSVNLAIE MGARIGEIED MCGPLQEAAR QPDADGTRAF REAWVEKADR 
LCDLAQDDEA LGRRLSAGEK YKRAAIYLIT AERMLAHDAP GRLELYRRSL DTFDKGIALS
GENCEHVAIP YGDQHLSGLL VKAKNADARS PLLVQVNGLD STKEMKYFVG LPAWLAARGV
SSLIVDQPGT GEALRLHGLN AVYNSEVWAS KVVDWLEGRD DVDPKRIGME GVSLGGYYCP
RAVAFEPRFA CGVVWGANHD WRDVQKKRLQ REGNFPVPHY WKHVCWVWGA KDVDDFMRIA
ENVHLDGVLD RIKVPFLVTH GSQDSQIPVA WAHRTYEQLV NSPKRELKIF TEREGGVQHS
SFDNSINGGH FIADWVAETL GGRTSL