Gene BamMC406_4828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_4828 
Symbol 
ID6179832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp1968031 
End bp1969161 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content68% 
IMG OID641684583 
Producthypothetical protein 
Protein accessionYP_001811494 
Protein GI172063843 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.454319 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACCC CTCTGCAACA CGTCCTCGTC ATAGGCGGCG GTTTTTCCGG TATGGCGACG 
GCGATCCAGT GCGCGAAGCT CGGCCTCACT GTCGACCTCG TCGAGATCGA CCAGGGCTGG
CGCTCGTACG GCGCCGGCAT CAGCATTGGC GGCCCCACGT TGCGCGCGCT GCGCACGATC
GGCGTGCTCG ACGCCTTCTT CGAACGCGGC CACGGCGGCG ACGGCGTGAA TCTGTACACG
GCCGGCGGCC AGTCGATCGG CGTGCTGCCG ACTCCGCGAG TGGCTGGCGA GGACGTTCCA
GGCGGCGGTG CGATCATGCG CCCGGCGCTG GCCGATATTC TCGCCAAGGC GACACGCGCC
GCCGGCGTGC GCGTGAAGCT CGGCTGTACC TTCGCTCGGA TCGAGCCGCG CGGCGAACAA
GTGGACGTGG CGTTCACGGA CGGCACGCAC GGTACCTACG ATCTCGTGGT GGGAGCGGAC
GGCCTCTACT CGAAAGTGCG CGCCGCTGCG TTTCCCGATG CGCCGAAGCC GCGCTATACC
GGCCAGGGCG TGTGGCGCGC CGTGGTGCCG CGACCGGCGG AGATCGCTTG CGCGACGATG
TGGCTGGGGC ACCGGATCAA GGCGGGTGTC AATCCGGTTT CCCGGGAGGA AATGTACGTC
TTCGTCACCG AGGACAGGCC GACCAACGAC TACATCGATC CCGCCGAATG GCCACGCATG
CTGTCCGAGT TGCTGGCCAT GTTCGACGTG CCGCTGATCC AGTCCATCCG CGCGCAGATC
GGCGCCGAAT CGCACGTCAA CTACCGTCCG CTGGAAAGCC TGCTGCTGCC GGCGCCCTGG
TTCAGCTCAC GGGTGGTGCT CGTCGGTGAT GCGGTGCACG CGACCACGCC GCACATGGCG
GCGGGCGCGG GCATTGGCAT CGAGGATGCG ATCGTGCTTG CCGAAGAGCT GGGGCGCGGT
GTGACGGTGG AAGCTGCCTT GCAGGCATTC CAGGCGCGCC GCTGGGAGCG CTGCCGCATG
GTGGTGGAAA ACTCCGGGCG TCTTGGCGAG ATCGAGATTG GCGGGGGCGA CAAAGAGGAA
CACCGGCGCA TCATGCACGA GACGCACATG AGTCTCGCGC GGCCTATCTG A
 
Protein sequence
MATPLQHVLV IGGGFSGMAT AIQCAKLGLT VDLVEIDQGW RSYGAGISIG GPTLRALRTI 
GVLDAFFERG HGGDGVNLYT AGGQSIGVLP TPRVAGEDVP GGGAIMRPAL ADILAKATRA
AGVRVKLGCT FARIEPRGEQ VDVAFTDGTH GTYDLVVGAD GLYSKVRAAA FPDAPKPRYT
GQGVWRAVVP RPAEIACATM WLGHRIKAGV NPVSREEMYV FVTEDRPTND YIDPAEWPRM
LSELLAMFDV PLIQSIRAQI GAESHVNYRP LESLLLPAPW FSSRVVLVGD AVHATTPHMA
AGAGIGIEDA IVLAEELGRG VTVEAALQAF QARRWERCRM VVENSGRLGE IEIGGGDKEE
HRRIMHETHM SLARPI