Gene BamMC406_4824 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_4824 
Symbol 
ID6180355 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp1964397 
End bp1965404 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content67% 
IMG OID641684579 
Productfumarylacetoacetate (FAA) hydrolase 
Protein accessionYP_001811490 
Protein GI172063839 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTCG CCACCTTGCC CGATGGCGGC GCCGATGGCC GCTTGCTGCT CGTGTCGCGC 
GACCTGCGCC ATGCCGTCGA GGCCACGCCG ATCGCAACGA CGCTGGTTGA TGTACTTGAT
CGCTGGGACG CGCTCGCGCC CGGCCTGCAG GCGCGTTACG ACGCGTTGAA TGCCGGTAGC
GTGCCCGAGG CGTATCCATT CCATCCGGCC GCATGCGCTG CGCCCTTGCC GCGCAGTCCG
CAGTGGTGCG ACGGCTCGGC GTTTCTGAAT CACGGCCGCC TGATGGAGCA GGCGTTCAAT
ACTCCGCCGA TTCCCATGTT CGATACGGTG CCGGTCATGT ACCAGGGCGC CAGCGACGAC
TTCCTCGGCC CGGCCAGCGA CGTGCCCTTG CCTGAAGAGG CCGACTGCAT CGACTTCGAA
GGCGAATTCG GTGTGGTGGT GGGGCACGTG CCGATGGGCG TATCGGCCGC CGGTGCGCTG
CGCTGCATCC GCCTGATCGT ACAGCTCAAC GACTGGAGCC TGCGGGCGTT CGGCCCGCGC
GAAATGAAGA CGGGCTTTGG TTTCCTGCAG GCCAAGCCGT CTACGAGCTT TGCACCGGTT
GCCGTCACGC CAGACGAACT CGGCGAGCAC TGGCGCGACG GCCGCGTGCA TCTGAGCCTG
CACGTCGAAT GGAACGACCG CTGGTTCGGT CATCCGCATG GACGCGAAAT GAACTTCGGC
TTCGGTGAAC TTGTCGCGCA TGCGGCCCGC ACGCGCCGCC TGTCGGCGGG GACGATAGTC
GGGTCCGGCA CGGTGTCGAA TGCCGATCGC AACGCGGGCT CGGCGTGCCT CGCCGAGCGC
CGCGTGATCG AAATGATCGA CGAAGGGGCC GCGCGCACGA GGTTCATGCG CTTTGGCGAC
CGGGTCAGGA TGACGGCGCG CGATGACGCC GGCAACGCAC CGTTCGGTAC GATCGATCAA
CGGGTTGTGC GCGCGCCGCG CGCCGACGAC GAGGAGGCTC GGCCATGA
 
Protein sequence
MKFATLPDGG ADGRLLLVSR DLRHAVEATP IATTLVDVLD RWDALAPGLQ ARYDALNAGS 
VPEAYPFHPA ACAAPLPRSP QWCDGSAFLN HGRLMEQAFN TPPIPMFDTV PVMYQGASDD
FLGPASDVPL PEEADCIDFE GEFGVVVGHV PMGVSAAGAL RCIRLIVQLN DWSLRAFGPR
EMKTGFGFLQ AKPSTSFAPV AVTPDELGEH WRDGRVHLSL HVEWNDRWFG HPHGREMNFG
FGELVAHAAR TRRLSAGTIV GSGTVSNADR NAGSACLAER RVIEMIDEGA ARTRFMRFGD
RVRMTARDDA GNAPFGTIDQ RVVRAPRADD EEARP