| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4817 |
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| Symbol | |
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| ID | 6181033 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 1954492 |
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| End bp | 1955391 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641684573 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001811484 |
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| Protein GI | 172063833 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.92045 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGAC TGCCACCGCT GAACTGGTTG CGCGCATTTG AATCTTCCGC ACGGCATTTG
AGTTTCACGC ACGCAGCAAA CGAACTGAAT CTCACGCAGG CCGCCGTGAG CCAGCAGGTC
AAAGGCCTCG AATCGCAACT CGGCGCCGCC CTGTTTCGTC GGCTCCCCCG CGGCATCGAA
ATGACGGAAG CGGGTCTGGC CTATCTCCCA GTCGTTCACG AAGCGATCGA GCGCCTCGCT
ATCGCGACGG ACGAAATCTT CGGTCAAGTT AATCTGCGCG TACTGACAGT ACGCGTCAGC
CTGGTGTTCT ACACACAATG GCTGGCGTCG AGAATGCCCG AATTCCGTCG GCTGCGCCCG
GACATCAATC TGCGGATCAC GAGCAACATC TGGGGAGGCG ACAGCTGCGT GACGGATGTC
GAAGCCGATC TGGAAATTCG CCACGGCCAC GGCAAATGGG CCGGGCTACG CGCCGAGCGA
CTCACGTACG ACAAGCTCGT GCCCGTCTGT TCGCCGAATC TACCCTCCGC ATCGCAACCG
CTCGAACGCC CAAGAGATCT CGCCGGTCAC GAACTTCTGC ACGTACTCGG TTACGAGGAA
GGTTGGGGTT ATTGGCTACG CAAGGCCGGC GCAGCCAAGG TCGACTCATC GCGCGGCATC
TACTTCGACA CGCTGATTTC GGCCCTCAAG GCTGCCGAAC TCGGTCAGGG CGTCGCGCTC
GCCCGCTCGT CCCTGGTCGA GCAAATGCTT GCAAATGGCC AACTGATCGC GCCGCTCCTG
CCGCACCTTC CAACCCAGGA AGCCTTCTGG CTCGTCTATT CCCCACACGC GATCGTTAAC
CCTAATGCGA AGGCGTTTGT CGACTGGCTC GTTGCCGCAG CAACCGACAG TCCGTCTTGA
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| Protein sequence | MKRLPPLNWL RAFESSARHL SFTHAANELN LTQAAVSQQV KGLESQLGAA LFRRLPRGIE
MTEAGLAYLP VVHEAIERLA IATDEIFGQV NLRVLTVRVS LVFYTQWLAS RMPEFRRLRP
DINLRITSNI WGGDSCVTDV EADLEIRHGH GKWAGLRAER LTYDKLVPVC SPNLPSASQP
LERPRDLAGH ELLHVLGYEE GWGYWLRKAG AAKVDSSRGI YFDTLISALK AAELGQGVAL
ARSSLVEQML ANGQLIAPLL PHLPTQEAFW LVYSPHAIVN PNAKAFVDWL VAAATDSPS
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