| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4791 |
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| Symbol | |
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| ID | 6180741 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 1925446 |
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| End bp | 1926840 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641684550 |
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| Product | transcriptional regulator |
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| Protein accession | YP_001811461 |
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| Protein GI | 172063810 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.629635 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACACGC TGCGCGCGCG GATCGCGAGC CGCGCGCTGA TGCCCGGCGC GCGCGTACCG
TCGATCCGGA TGATGGCCGA CGGGCTGCAC GTGTCGAAAT CGACCGTCGT CGATGCGTAC
GAGCGGCTCG CGAGCGAAGG CGTGCTGGTC GCGCGGCGCG GCTCCGGCTT CTACGTGTCG
GGTCATGCGC CGCCGCTCGC GCTCGCCGAG CTCGGCCCGC GCCTCGATCG CGAGCTCGAT
CCGCTGTGGC TGTCGCGCCA GTCGCTCGAG GCGGCGCCGA ACTCCGTGAA GCCCGGCTGC
GGCTGGCTGC CGTCGTCGTG GCTGCCGGAC GAGAGCCTGC GCCGCGCGCT GCGCTCGGTA
TCGCGCGACG AACCCGACGC GCTGACCGAC TACGCGACGC CGCTCGGGCT GCCCGCGTTG
CGCCAGCAGC TCGCGTGGCG GCTCGCGCAG CACGGCGTCC AGACGGAGCC CGCGCAGATC
ATGCTGACCG ACGGCGGCAC GCATGCGCTC GATCTCGTGT GCCGGCTGCT GCTGGAGCCG
GGCGACACCG TCGTGCTCGA CGACCCGTGC TACTTCAACT TCCAGGCGCT GCTGCGCGCG
CATCGCGCGC GGATCGTCAG CGTGCCGTAC ACACCGAACG GCCCCGATCT CGCGCGCTTC
GAACAGGTGC TCGCCGAGCA CCGGCCGCGC CTGTACATCA CCAACTCGGC ACTGCACAAC
CCGACCGGCG CGACGCTCGC GCCGCCGGTC GCGCACCGGC TGCTGACGCT GGCGGCCGAA
CACGGCCTGC TGATCGTGGA GGACGACATC TTCGCGGATT TCGAAAGCAC GCCCGCACCG
CGCCTCGCGG CGTTCGACGG GCTGTCGCGC GTCGTGTCGA TCGGCAGTTT CTCGAAAACG
CTGTCGGCTG CGATCCGCTG CGGCTATGTC GCCGCACGCC CCGAGTGGAT CGACGCGCTC
GTCGACCTGA AGCTCGCGAC GTCGTTCGGC AATGCGCAGA TCGGCGCGAA CGTCGTGCAC
CGGCTGCTGG TCGACGGCAC GTACCGGCGC CATCTCGACA GCCTGCGTGC GCAACTGGCC
GATGCGATGG GCGAAACGAT CCGGCGGCTC GCGCGCGCCG GGCTCGGGAT CTGGACGGAG
CCGCGCGGCG GCCTGTTCGT GTGGGCGGAG CTGCCGGACG GGCTCGATGC GGCGCGCGTC
GCGCGTCATG CGCTCGATCA CGACGTCGTG CTCGCGCCAG GTGATGTATT CAGCGCGTCG
CACAGCGCGA CGTCGTTCAT GCGCTTCAAC GTGTCGCGCT GCAAGGGGCC GGCGGTATTC
GATGCGCTGG CGCGGGCGAT GGACGCGGCG CGTGTGGCCG AACGCAGCGG CCGCACACTG
GCCGACCAAC GATGA
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| Protein sequence | MDTLRARIAS RALMPGARVP SIRMMADGLH VSKSTVVDAY ERLASEGVLV ARRGSGFYVS
GHAPPLALAE LGPRLDRELD PLWLSRQSLE AAPNSVKPGC GWLPSSWLPD ESLRRALRSV
SRDEPDALTD YATPLGLPAL RQQLAWRLAQ HGVQTEPAQI MLTDGGTHAL DLVCRLLLEP
GDTVVLDDPC YFNFQALLRA HRARIVSVPY TPNGPDLARF EQVLAEHRPR LYITNSALHN
PTGATLAPPV AHRLLTLAAE HGLLIVEDDI FADFESTPAP RLAAFDGLSR VVSIGSFSKT
LSAAIRCGYV AARPEWIDAL VDLKLATSFG NAQIGANVVH RLLVDGTYRR HLDSLRAQLA
DAMGETIRRL ARAGLGIWTE PRGGLFVWAE LPDGLDAARV ARHALDHDVV LAPGDVFSAS
HSATSFMRFN VSRCKGPAVF DALARAMDAA RVAERSGRTL ADQR
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