Gene BamMC406_4790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_4790 
Symbol 
ID6180740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp1924368 
End bp1925255 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content70% 
IMG OID641684549 
Producthypothetical protein 
Protein accessionYP_001811460 
Protein GI172063809 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.430049 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAAAAGA CGACCGACGG ATGGCTCAGC GGCCTGCTGG GCGTGATCAT CTTCAGTGGC 
TCGCTGCCGG CGACGCGCAT CGCGGTGCAG GGGCTCGACC CGCTGTTCCT CACGTTCGCG
CGCGCGACGA TCGCCGGCGT ACTCGGCCTG ATCCTGCTCG TCGCGCTGAA GCAGAAGCGG
CCGACGCGCG CCGAGACCGT GTCGCTCGTC ATCGTCGCGC TCGGGGTCGT GGTCGGTTTT
CCGTTGCTGA CCGCGCTCGC GCTCAAGCAT GTGACGTCCG CGCATGCGAT CGTGTTCGTC
GGGTTGCTGC CGCTCGCGAC CGCGCTGTTC GGCGTCTGGC GCGGCGGCGA ACGGCCGCGG
CTGCCGTTCT GGATCTTCTC GCTGGTCGGC AGCGGCGCGG TGGCCGCGTT CGCGCTGCGC
AACGGCGGCA GCGCATCGGT GGTGGGCGAT GCGCTGATGC TGGCCGCGAT CGTCGCGTGC
GGGCTCGGCT ATGCGGAAGG CGCGCGCCTG TCGCGCCAGC TCGGCGGCTG GCAGGTGATC
TCGTGGGCGC TCGTGCTGTC GCTGCCGGTG ATGCTGCCGC TCACGTGGTT CACGTGGCCC
GCGACGTTCG ACGGCGTCGA CGCTGCCGCG CTGTGGGGGC TCGCGTACGT GTCGTTGTTC
AGCATGCTGA TCGGCTTCGT GTTCTGGTAT CGCGGCCTCG CGCTCGGCGG GATCGCGGGC
GTCGGCCAGT TGCAGCTGCT GCAGCCGTTC TTCGGCTTCC TGCTCGCGGC CGGGCTGCTG
CACGAGACGG TGCCGCCGTC GATGCTCGCC GTGACGGTCG TGGTCGTCGC CTGCGTGGCG
GGTGCGAAAT ATTTCTCGAA GATGGCGCCC GTGCAGCGCG CGGGCTGA
 
Protein sequence
MQKTTDGWLS GLLGVIIFSG SLPATRIAVQ GLDPLFLTFA RATIAGVLGL ILLVALKQKR 
PTRAETVSLV IVALGVVVGF PLLTALALKH VTSAHAIVFV GLLPLATALF GVWRGGERPR
LPFWIFSLVG SGAVAAFALR NGGSASVVGD ALMLAAIVAC GLGYAEGARL SRQLGGWQVI
SWALVLSLPV MLPLTWFTWP ATFDGVDAAA LWGLAYVSLF SMLIGFVFWY RGLALGGIAG
VGQLQLLQPF FGFLLAAGLL HETVPPSMLA VTVVVVACVA GAKYFSKMAP VQRAG