Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_4773 |
Symbol | |
ID | 6180254 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 1910292 |
End bp | 1910951 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641684532 |
Product | polar amino acid ABC transporter, inner membrane subunit |
Protein accession | YP_001811443 |
Protein GI | 172063792 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGCAT TCGATCTGGT CATTCATACC CTGCCCGTGA TGGTGAGGGG CGCGCTGCTC ACGCTGAAGT TCGCGGTGGC GTCGATGGCG CTCGGCCTCG TCGTCGGGCT CGTGGTCGCG ATCATGCGCA TCGGCAGCAA CCGGCTCGCA TCCGGTCTCG CGCAGGGCTA CGTCAGCTTG ATGCGCGGCA CGCCGCTGCT CGTGCAGATG TTCGTCGTCT ACTACGGGCT GCCCGATCTC GGCATCACGC TCGATCCGAC GACGGCCGGC ATCTTCACGC TGACGCTCAA CGCCGGCGCG TACCTGTCGG AAAGCATGCG CGGCGCGATC CTCGGCATCG GCCGCGGGCA ATGGGCGGCC GCGCACAGCC TCGGCCTCAC GCACGTGCAG ACGCTGCGCT ACATCGTCTG CCCGCAAGCG CTACGCCTCG CAGTGCCGAG CCTCGGCAAC ACGCTGATCA GCCTGATCAA GGACACGTCG CTCGTGTCGG TGATCACCGT CACCGAGCTG CTGCGCTCGA CGCAGGAAGT CATCGCCGCG ACGTTCCAGC CGCTGCCGCT GTACCTCGCC GCCGCCGCGC TCTACTGGGT GCTGAGCACG CTGCTCACGC GGCTGCAGGG CCGCGTCGAA ACGCGCCTGT CGCTGCCGTC CGCGCATTGA
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Protein sequence | MEAFDLVIHT LPVMVRGALL TLKFAVASMA LGLVVGLVVA IMRIGSNRLA SGLAQGYVSL MRGTPLLVQM FVVYYGLPDL GITLDPTTAG IFTLTLNAGA YLSESMRGAI LGIGRGQWAA AHSLGLTHVQ TLRYIVCPQA LRLAVPSLGN TLISLIKDTS LVSVITVTEL LRSTQEVIAA TFQPLPLYLA AAALYWVLST LLTRLQGRVE TRLSLPSAH
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