| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4754 |
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| Symbol | |
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| ID | 6179633 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 1890499 |
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| End bp | 1891332 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641684513 |
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| Product | LuxR family transcriptional regulator |
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| Protein accession | YP_001811424 |
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| Protein GI | 172063773 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATATG CTGACGACGC GCCACGCGTC GAGTGGTTTT CGCAAGCCGA TATCGCGGCC
GCTGCCGCTT ATTCGAAAGA AATTCATGCA TTCGAGCGCG ACGTTTTTAC CGGCATTCAA
ATCGCGCCCG GTAAATCCGA CCTGAGTCTC GTCGACTTCG CCCAATGCCA TGCGCGATTG
CGGCAAATCG GTTTCAGCAC GCTCGGTTAC GGCGCCTACG AGATGATCGG GCGGCGCATC
CTGTGCGCGC ATCTGCTGCG CGACCTCGCG CCCGCGACGT TCATGCAGCC GTATATCGAC
GGCATGCTCT ACGAGAGCGA CCCGCGTTTC GCCGAGGTGC GGCAGAGCGG CTTTCCGGTC
GCGTGGCGGC TCGACGAGAT CGAGTCGGCC GCGCAGGGCA GTGGCGACCG CAAGGTGCTC
GCGCTGGCCG GCCATTTGCG TGCGCACGCA ATGAACAGCG GCGTGATCTT CAGCCTGTCG
GCGCCGCGGC TCGACCTGCG CGTCGCGGTG AACGTGACGT CGGAAGCCCA CGGCACCGAG
TGGATCGACG ATCGCGTGAT CGGCGGCGCG CTGTCGGTGA GTCTTGCCGT GCACCGCATC
GCGCTGCCGT TTCTCGAGGC GCGCATCGCG CGCATGCGCG GCTTCGCGCT CGGCGACGAG
CAGCAGCAGG TGCTCGAGCG CCTCGTGCAC GGGCTGTCCG ACCAGGAGAT CGCCAGCGCG
TTGCGCACGT CGCTGCACAA GGTCGGTCAC CATATCCGTT CGCTCGAAAA ACTCTTCAAC
GTCCAGAACC GCGCGCAGCT CGCGTACCTC GCCGCGCGCC GTCTGCAGTC CTGA
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| Protein sequence | MTYADDAPRV EWFSQADIAA AAAYSKEIHA FERDVFTGIQ IAPGKSDLSL VDFAQCHARL
RQIGFSTLGY GAYEMIGRRI LCAHLLRDLA PATFMQPYID GMLYESDPRF AEVRQSGFPV
AWRLDEIESA AQGSGDRKVL ALAGHLRAHA MNSGVIFSLS APRLDLRVAV NVTSEAHGTE
WIDDRVIGGA LSVSLAVHRI ALPFLEARIA RMRGFALGDE QQQVLERLVH GLSDQEIASA
LRTSLHKVGH HIRSLEKLFN VQNRAQLAYL AARRLQS
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