Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_4752 |
Symbol | |
ID | 6181179 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | - |
Start bp | 1887781 |
End bp | 1888059 |
Gene Length | 279 bp |
Protein Length | 92 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641684511 |
Product | HrpO family type III secretion protein |
Protein accession | YP_001811422 |
Protein GI | 172063771 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4794] Type III secretory pathway, component EscS |
TIGRFAM ID | [TIGR01403] type III secretion protein, HrpO family |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGAGCT CGACGATCCT CGACCTGACG CGGCAGGCGC TGATGCTGGT GCTGCTGCTG TCGCTGCCGA TCGTGCTGAT CGCGACCGTC ACCGGTCTCG TCGTCGCGAT CCTGCAGGCG GTCACGCAGG TGCAGGACGC CAACATCGGC ATCGCGGTGC GGCTGATCGC CGTGATGGTC GCGCTGGTGC TGCTGTCGGG CTGGCTCGGC AGCGAGGTGC TGCGCTTCGC GCAGCAGGCG CTTGAACGCA TGTTCGTTTC TTCCACAGGA GTGCTTTGA
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Protein sequence | MTSSTILDLT RQALMLVLLL SLPIVLIATV TGLVVAILQA VTQVQDANIG IAVRLIAVMV ALVLLSGWLG SEVLRFAQQA LERMFVSSTG VL
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