| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4747 |
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| Symbol | |
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| ID | 6179373 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 1882422 |
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| End bp | 1883309 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641684506 |
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| Product | YscJ/HrcJ family type III secretion apparatus lipoprotein |
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| Protein accession | YP_001811417 |
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| Protein GI | 172063766 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4669] Type III secretory pathway, lipoprotein EscJ |
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| TIGRFAM ID | [TIGR02544] type III secretion apparatus lipoprotein, YscJ/HrcJ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.315409 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.53409 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACGA TCGATTCGAC GCCGCGCATG CATGCGTGGC GCAGCCGGGC GGCGCGTGCG
CTGCTCGCGG GGCTGCTCGC GCTGCTGGCC GGCTGCCAGA AGGAGCTTTA CTCCGGCCTG
TCGGAGCGCG ACGCGAACCA GATGGTCGCC GTGCTCGGCG CCGCGGGCAT CAGCGCGTCG
AAGGACAACG ACGCGCGTGA CACGTCGGAT CGCAACGCGT GGCTCGTGAG CGTCGCCGAC
GGCGACATGC AGTCGGCGCT GACCGTGCTG CAGGCGAACG GGTTGCCGAA GCCGAGCTAT
GCGAGCCTCG GCGAGCTGTT CCAGAAGCAG GGGCTCGTCT CGACGCCGGC CGAGGAGCGC
GTGCGCTATC TGTACGGCGT GTCGCAGGAT CTGTCGCGCA CGTTGCAGGA CATCGAGGGC
GTGGTGGTCG CACGCGTGCA GGTCGTGATT CCGGAGAACG ATCCGCTCGC GGACAAGATC
AAGCCGTCGT CGGCGGCCGT GTACATCCGC TATCGGCCCG GCGTGGACCT GCGCGCGATG
GCGCCGATGG TCAAGGATCT CGTCGCGCAC AGCATCGAGG GGCTGCAGTA CGACAACGTA
TCGCTGTTCC TGCAGCCGGC CGCCGCGCGC ACGACGCGCG TGGACGGCAT CGGCAGCGCG
GTATCGGACA TCCTGCGGCT GCGCTCGCCG CTGGGCTGGC TGGTGTTCGC GCTGATCCTG
CTGACCTGCG CGGTGATCGC GCTGTCGGCC GCGCGGCGCG GAATGTTCGG CGCCCGGCTG
GCCGGGCTGG TCGGCACGCC GCGCGGCGCG AACGGGGCCG GCGGCGGGGC CGCGCAGTCG
GGCGGCGGCA GCCTGCGCAC GCCGGACGGC GCGCGCGACG GCGCATGA
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| Protein sequence | MTTIDSTPRM HAWRSRAARA LLAGLLALLA GCQKELYSGL SERDANQMVA VLGAAGISAS
KDNDARDTSD RNAWLVSVAD GDMQSALTVL QANGLPKPSY ASLGELFQKQ GLVSTPAEER
VRYLYGVSQD LSRTLQDIEG VVVARVQVVI PENDPLADKI KPSSAAVYIR YRPGVDLRAM
APMVKDLVAH SIEGLQYDNV SLFLQPAAAR TTRVDGIGSA VSDILRLRSP LGWLVFALIL
LTCAVIALSA ARRGMFGARL AGLVGTPRGA NGAGGGAAQS GGGSLRTPDG ARDGA
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