Gene BamMC406_4734 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_4734 
Symbol 
ID6180641 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp1855184 
End bp1857394 
Gene Length2211 bp 
Protein Length736 aa 
Translation table11 
GC content70% 
IMG OID641684493 
Productaldehyde oxidase and xanthine dehydrogenase molybdopterin binding 
Protein accessionYP_001811404 
Protein GI172063753 
COG category[C] Energy production and conversion 
COG ID[COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.491713 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.423215 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATCG AACTCGACAA CCCCGACTCG GTGCGCCCGT CGCGCCGCAC CTTCCTGAAG 
GCCGCGGGCG CCGCGGCCGC CGTCAGCCTG ACGATCGGCT TCGAATGGGC CGGCCTCGGC
CGCCGCGCGC TCGCCGCGAC GGCGCCCGCC GCCGACTTCG CGCCGAACGC ATTCCTGCGC
ATCACGCCCG ACGGCAAGGT CACCGTGATC GCCAAGCATG TCGAAATGGG CCAGGGCGCG
TATACGGGCA TCGCGACGAT CGTCGCCGAG GAGCTCGACG CCGACTGGTC GAGCGTGCGC
GTCGAAAGCG CGCCGGCCGA TGCGAAGCGC TATGCGAACC TCGCGTTCGG CACGATGCAG
GGCACGGGCG GCAGCTCGGC CATGTCGAAC TCGTGGCAGC AGTTGCGCGA AGCGGGCGGC
AAGGCGCGCG CCATGCTCGT GTCGGCCGCC GCGGCCCGCT GGAAGGTGCC GGCCGGCGAG
CTGACCACCG CCAACGGCGT CGTCACGCAT GCGAAGAGCG GCAAGACGGC GGCCTACGGC
ACGCTGGTCG CCGATGCATC GAAACTGCCG GTGCCCGACA AGGTCACGCT GAAGCAGCCG
GCCGACTTCA AGCTGATCGG CCATCGCATT CCGCGCGTCG ACGGGTCGGC CAAATCGAAC
GGCACCGCGC AATTCACGCT CGACACCACC TTCCCCGGCA TGCGCGTCGC GCTGCTGCAG
CGCCCGCCGC GCTTCGGCGC GACCGTCAAG TCGTTCGACG CGACGGCCGC GAAGGCCGTG
CCGGGCGTGG TCTCGGTCGT GCAGGTGCCG GGCGGCGTCG CGGTCGTCGC GACCGGCTTC
TGGGCCGCGA AACAGGGCCG CGACGCGCTG AAGGTCGAAT GGGACGAAGC GAACGCCGAG
AAGCGCGGCT CGGACGAGAT CATGCGCGAA TACCGGCAGC TCGCCGCGAA GCCCGGCACG
TCGGCACGCA AGGACGGCGA TGCCGACGCG GCGATCGCGG GCGCCGCGCG CAAGATCAGC
GCGACCTACG AGTTTCCGTA TCTTGCCCAT GCACCGATGG AGCCGCTCGA TGCGGTCGTC
AAGCTGACGG CGAACAGCTG CGAGATCTGG GCCGGCGACC AGTTCCAGAC GGTCGACCAG
GGCAACGCCG CCAAAGTCGC GGGCCTGAAG CCCGAGCAGG TGCGGATCCA CACGCTGTAC
GCGGGCGGCA GCTTCGGCCG GCGCGCGAAC GCGTGGTCGG ACTATGTGGT CGAGGCCGTG
TCGATCGCGA AGGCGCTCGG TGCGGACGGC AAGCCGGTCA AGCTGCAGTG GACGCGCGAG
GACGACATCC AGGGCGGCTT CTATCGCCCG ATGTACTTCC ACAAGCTCGA CGCAGGGCTG
ACGGCGGACG GCAAGCTGGT CGGCTGGCGC CACCGGATCG TCGGCCAGTC GATCCTCGCC
GGTACGCCGT TCGAGGCGTT CATGGTGAAG AACGGGATCG ACGCGACGTC GGTCGAGGGC
GCGGCGAACC TGCCGTACGC GGTGCCGAAC GTGTCGGTCG AGCTCACCAC CACCAAGGTC
GGCCTGCCCG TGCTGTGGTG GCGCGTGGTC GGCAGCTCGC ACACCGCGTA TGCGGTCGAG
GCATTCGTGG ATGAAGCCGC GCACGCGGCG GGCAAGGATC CGTACCTGTT CCGGCGCGAC
CTGCTCGCGA AGGAGCCGCG GATGCGCGCC GTGCTCGAGC TGGCCGCGCA GAAGGCCGGC
TGGGATCCGG CGAAACCGCT GCCGAAGGGC CGCGGGCGCG GGATCGCGGT GGCCGAGGCG
TTCAAGAGCT ATGTCGCGCA GGTGGCCGAG GTGTCGGTGG ACGCCGACGG CAAGGTGAAG
GTCGAGCGCG TGGTGTGTGC GGTCGATTGC GGCATCGCGA TCAACCCGGA TATCGTCGCC
GCGCAGATGG AAGGCGGCAT CGGCTTCGGG CTCGGCGCGG CGCTGCACAG CGCGATCACG
CTGAAGGACG GTCACGTCGA GCAGCGCAAC TTCGACGGCT ACCACGTGCT GCGGATGGCG
GAGATGCCGA AGGTCGAGGT GCATATCGTG CCGTCGGCGG AGGCGCCGAC CGGCGTCGGG
GAGCCGGGTG TCGCGCCGAT CGGGCCGGCG GTCGCCAACG CGATCTTCGC GGCGACCGGC
AAGCGGCATT ATGTGCTGCC GTTCGAGTCG GGCGATAGCG CGAAGGCTTG A
 
Protein sequence
MTIELDNPDS VRPSRRTFLK AAGAAAAVSL TIGFEWAGLG RRALAATAPA ADFAPNAFLR 
ITPDGKVTVI AKHVEMGQGA YTGIATIVAE ELDADWSSVR VESAPADAKR YANLAFGTMQ
GTGGSSAMSN SWQQLREAGG KARAMLVSAA AARWKVPAGE LTTANGVVTH AKSGKTAAYG
TLVADASKLP VPDKVTLKQP ADFKLIGHRI PRVDGSAKSN GTAQFTLDTT FPGMRVALLQ
RPPRFGATVK SFDATAAKAV PGVVSVVQVP GGVAVVATGF WAAKQGRDAL KVEWDEANAE
KRGSDEIMRE YRQLAAKPGT SARKDGDADA AIAGAARKIS ATYEFPYLAH APMEPLDAVV
KLTANSCEIW AGDQFQTVDQ GNAAKVAGLK PEQVRIHTLY AGGSFGRRAN AWSDYVVEAV
SIAKALGADG KPVKLQWTRE DDIQGGFYRP MYFHKLDAGL TADGKLVGWR HRIVGQSILA
GTPFEAFMVK NGIDATSVEG AANLPYAVPN VSVELTTTKV GLPVLWWRVV GSSHTAYAVE
AFVDEAAHAA GKDPYLFRRD LLAKEPRMRA VLELAAQKAG WDPAKPLPKG RGRGIAVAEA
FKSYVAQVAE VSVDADGKVK VERVVCAVDC GIAINPDIVA AQMEGGIGFG LGAALHSAIT
LKDGHVEQRN FDGYHVLRMA EMPKVEVHIV PSAEAPTGVG EPGVAPIGPA VANAIFAATG
KRHYVLPFES GDSAKA