| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4724 |
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| Symbol | |
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| ID | 6179770 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 1844274 |
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| End bp | 1845239 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641684483 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_001811394 |
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| Protein GI | 172063743 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.847627 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.102822 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCACG CATCGCCCAC TGCATTGCCT GCCACATCGC CCGCTTCCTT CCCGCGCCGC
GGCACCCGCC TCGCGGCCCT TGCCACGCTT GCCGTCGCGG CCATGCTGCC GGCCGTCGCG
CATGCCGCGC CGCTGCGCAT CGGCATGACG TTCCAGGAGC TGAACAACCC GTATTTCGTG
ACGATGCAGA AGGCGCTTAA TGACGCGGCC GCATCGATCG GCGCGCAGGT CGTCGTCACC
GACGCGCATC ACGACGTCAG CAAGCAGGTG AGCGACGTCG AGGACATGCT GCAGAAGAAG
ATCGACATCC TGCTCGTGAA CCCGACCGAC TCGACCGGCA TCCAGTCCGC GATCACGCAG
GCGAAGAAGG CCGGCGCGGT GGTCGTGGCC GTCGATGCGA ACGCGAACGG CCCCGTCGAT
TCGTTCGTCG GCTCGAAGAA CTACGACGCC GGCGTGATGT CCTGCGAATA CCTCGCGAAA
GCGATCGGCG GCAGCGGCGA GGTGGCGATC CTCGACGGCA TTCCGGTCGT GCCGATTCTC
GAGCGCGTGC GCGGCTGCAA GGCCGGGCTC GCGAAATTCC CGAACGTGAA GCTGGTCGAC
ACGCAGAACG GCAAGCAGGA GCGCGCGACC GCGCTGTCGG TGACCGAGAA CATGATCTCC
GCGCATCCGA ACCTGAAGGG CATCTTCAGC GTGAACGACG GCGGCTCGAT GGGCGCGCTC
GCGGCGATCG AGGGTTCCGG CAAGGACATC AGGCTGACGA GCGTAGACGG CGCGCCCGAG
GCGATCGCGG CGATCCAGAA GCCGAACTCG AAGTTCATCG AGACGACCGC GCAGTTTCCG
GCCGACCAGG TGCGCATCGC GCTCGGCATC GCGATCGCGC GCAAGTGGGG CGCGACGGTG
CCGAAGGCGA TTCCGGTCGA CGTGAAGGTC GTCGATCGCG GCAACGCGAA GGGGTTCAGT
TGGTGA
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| Protein sequence | MTHASPTALP ATSPASFPRR GTRLAALATL AVAAMLPAVA HAAPLRIGMT FQELNNPYFV
TMQKALNDAA ASIGAQVVVT DAHHDVSKQV SDVEDMLQKK IDILLVNPTD STGIQSAITQ
AKKAGAVVVA VDANANGPVD SFVGSKNYDA GVMSCEYLAK AIGGSGEVAI LDGIPVVPIL
ERVRGCKAGL AKFPNVKLVD TQNGKQERAT ALSVTENMIS AHPNLKGIFS VNDGGSMGAL
AAIEGSGKDI RLTSVDGAPE AIAAIQKPNS KFIETTAQFP ADQVRIALGI AIARKWGATV
PKAIPVDVKV VDRGNAKGFS W
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