Gene BamMC406_4714 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_4714 
Symbol 
ID6181407 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp1834203 
End bp1834886 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content64% 
IMG OID641684473 
Productputative hydroxylase 
Protein accessionYP_001811384 
Protein GI172063733 
COG category[S] Function unknown 
COG ID[COG3128] Uncharacterized iron-regulated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.730869 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCTTC ATATCCCCGG CGTGCTGACC AACGCGCAGG TCGCGCAATG CCGCGAGCTG 
CTCGATGCTG CCGATTGGGT CGACGGCAAT GCGACGTCCG GCGCGCAGTC GGCGCTCGCG
AAACGCAATC GGCAGTTGCC GGAAGGATCG CCCGTCGCGC GCGCGGTCGG CGACGCGATC
CAGGATGCGC TGGCGCGTCA TGCGCTGTTC TTTTCGGCAG CGCTGCCATT GAAGGTGTTT
CCGCCGCTCT TCAATCGCTA TGCAGGCGGC GAGACGTTCG GCACGCACGT GGACAACGCG
ATCCGGCTGC TGCGCGGCAC GGATTTCCGC GTGCGCAGCG ATCTGTCGGC GACGCTGTTT
CTCGCGGAGC CCGATGCGTA CGACGGCGGC GAGCTGTGCG TGGAAGATAC GTACGGCGTG
CATCGCGCGA AGCTGCCGGC CGGCGATCTC GTGCTGTATC CGGCGTCGAG CCTGCATCAC
GTGACGCCCG TTACCCGGGG CGAACGCGTT GCGTCGTTCT TCTGGATTCA GAGCATGGTG
CGCGACGATG GGGACCGCAC GCTGCTGTTT CAGCTCGATA CGCAGATTCA GGCGCTGTCG
GCGGAAAAAG GCGCGAAGGA TCCGATGGTC ATTTCATTGA CGGGGATTTA TCACAACCTG
TTGAGGAAGT GGGCGGATGC GTAG
 
Protein sequence
MMLHIPGVLT NAQVAQCREL LDAADWVDGN ATSGAQSALA KRNRQLPEGS PVARAVGDAI 
QDALARHALF FSAALPLKVF PPLFNRYAGG ETFGTHVDNA IRLLRGTDFR VRSDLSATLF
LAEPDAYDGG ELCVEDTYGV HRAKLPAGDL VLYPASSLHH VTPVTRGERV ASFFWIQSMV
RDDGDRTLLF QLDTQIQALS AEKGAKDPMV ISLTGIYHNL LRKWADA