| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4713 |
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| Symbol | |
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| ID | 6181406 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 1833451 |
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| End bp | 1834206 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641684472 |
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| Product | Sel1 domain-containing protein |
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| Protein accession | YP_001811383 |
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| Protein GI | 172063732 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.767637 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGCCG TCTCGCTGAA GGCGCTCGCG TCGGTGTCGC CGCGCGCGTT CGCCGACATC
CTGGCCGGGC CGCCCGAGCG CGCCGCCGCG TGGGTCGCGG CGGCGGCCGA TCATGGGATC
GTCGACGCGC AGGCCGTCTA CGGACAGTAT CTGCTCGATG GACACGGCGT CGCGCGCGAT
CCGGCCGCCG CGTTCGGCTG GTTCGGGCAT GCGGCGCGGG CCGGCCATCC GATGGCGATG
AACATGCTCG GGCGCTGCTA CGAGTTCGGC TGGGGCACGG CCGCGTGCGC GCCGGTGGCC
GTGTACTGGT ACCGGCTCGC CGCGCAGGCT GGCCTCGACT GGGGCATGTA CAACTACGCG
ACGGCGCTCG CGCTCGGCAA CGGCGTCGAC GAGAACCGCG CCGACGCGCT CGACTGGTTT
CGCCGCGCGG CCGCGCTTGG ACACGCGAAG TCGATCAACC TGATCGGCGG ATTCTACGAG
GACGGCTGGG TCGTGCCCGC CGATGTCGAC ACCGCGTTCG ATCACTATCG CCGCGCCGCC
GAGGCCGGCG ACTTCCGCGG CCAGTTCAAC TATGCGCGGC TGCTCGCCGA GCGCGGGCGC
ATCGACGAAG CACTCGTCTG GCTCGCGCGC GTGCCGGCCA CCGCTACGCC GGCGTTCGTC
GCGAAGATGC GTGCGTATCT TGCGTCGTCG CCGCTCGCTG CGTTGCGCGC GGCGGCGCTA
CGGCTGCCGT CTCACGGCAT GGAATTCGAA TCATGA
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| Protein sequence | MKAVSLKALA SVSPRAFADI LAGPPERAAA WVAAAADHGI VDAQAVYGQY LLDGHGVARD
PAAAFGWFGH AARAGHPMAM NMLGRCYEFG WGTAACAPVA VYWYRLAAQA GLDWGMYNYA
TALALGNGVD ENRADALDWF RRAAALGHAK SINLIGGFYE DGWVVPADVD TAFDHYRRAA
EAGDFRGQFN YARLLAERGR IDEALVWLAR VPATATPAFV AKMRAYLASS PLAALRAAAL
RLPSHGMEFE S
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