| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4684 |
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| Symbol | |
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| ID | 6180840 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 1802823 |
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| End bp | 1803761 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641684443 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001811354 |
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| Protein GI | 172063703 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.738983 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGTTCC AGTCACGCTC ACACGAGGAC GTGCATGACC ACGGGCTCGC GATCGCCGGT
TGGCATCAGG TCTATCGCCA GATGACGCCG GGCCGGTTCA GGGGCACCGT CACGCAGGTG
CTGTACGACG ACTTCCATTT CTTCCGCGAG ACGACCAACC GGCGAGTCGC GCAAACCGGC
CTCGCGCCGG CCCGGCGCAC GTCGCTCGCG GTGCCGTTGT CGGTGCCGCT CGCGGGCACG
TTCCAGGGCC AGCCGGTCGA CGGCTATGCG CTGCTCGCGC TGCGCGCCGG CGAGGATTTC
GAATTCCATA CGCCGGAAGG GATGGGGCTG GTCGGGATCA GCGCCGCATC GGACATGATC
GACGAGCTGT GCGAAGCCGA GTTCGGCGCG GCCGGCGCGC GCAAGCTGCG GCACGTCACG
CGGCTGTCGG ACGAGCAGGG CGTCGCGCTC GGCGCGCGGC TGTCGTCGCT GATCGACGAC
GCGCAGCGCA ATCCCGGCTG CCTCGAATAC GCGGCCACCC GCAAGATGTT CCGCGACGCG
ATGCTCGGCA TGTTCCTCGA TGCGCTCGAC CAAGGCATCG GCGTCGAGCG CCGCGACATC
ACGCACGCTA CCTACAGCGA TATCGTCAGC CGTTGCGAGA AGCATCTGCG CGACCGGCCC
GAGGAACCCG TGACCGTGCT CGAACTGTGC CGCGCGCTGC GCTGCAGCCG CCGTACGCTG
CAGACGAGCT TCCAGCGCGT CGCCGACGTC ACGCCCGTCG GCTATCTGCG CACGATCCGG
CTGAACGCGG TGCGGCGCCT GCTGCGCACC ACTGGCGCGC ACCAGCTCGG CGTGGGCGAG
GCCGCCGCGA GCTGGGGCTT CACGCATCTG GGCTATTTCG CGCGAGAGTA TCGCGACCTG
TTCGGCGAGC TGCCGTCGCA GACCTTGCGT CCCGAATGA
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| Protein sequence | MLFQSRSHED VHDHGLAIAG WHQVYRQMTP GRFRGTVTQV LYDDFHFFRE TTNRRVAQTG
LAPARRTSLA VPLSVPLAGT FQGQPVDGYA LLALRAGEDF EFHTPEGMGL VGISAASDMI
DELCEAEFGA AGARKLRHVT RLSDEQGVAL GARLSSLIDD AQRNPGCLEY AATRKMFRDA
MLGMFLDALD QGIGVERRDI THATYSDIVS RCEKHLRDRP EEPVTVLELC RALRCSRRTL
QTSFQRVADV TPVGYLRTIR LNAVRRLLRT TGAHQLGVGE AAASWGFTHL GYFAREYRDL
FGELPSQTLR PE
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