| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4677 |
|---|
| Symbol | |
|---|
| ID | 6181452 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010552 |
|---|
| Strand | + |
|---|
| Start bp | 1795637 |
|---|
| End bp | 1796248 |
|---|
| Gene Length | 612 bp |
|---|
| Protein Length | 203 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641684436 |
|---|
| Product | lysine exporter protein LysE/YggA |
|---|
| Protein accession | YP_001811347 |
|---|
| Protein GI | 172063696 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1280] Putative threonine efflux protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.532936 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.98744 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCTGT CCGCGCTTGC CGTGTTCGCC ATCGCCCTGC TCGTCACCGC CGGCACGCCC
GGCCCGAGCG TCGCCGCGCT CGTCGCGCGC GTGCTGACGA ACGGCGTGCG CGACGTGCTG
CCGTTCCTCG CCGCGATGTG GATCGGCGAG GCGCTGTGGC TCACGCTGGC CGTCGCCGGG
CTGTCCGCGT TCGCGCGCAC GTTCGCGACG GGCCTGCTCG TGCTGAAGCT GCTCGGCGTC
GCGTATCTGC TGTTCCTCGC GTGGAAGATG TGGACCGCGC CGACCGACGC GCAGGCCGAC
GACCTGCCGC GCGGCCAGTC GCCGTGGCGC ATGTTCGTCG CTGGCACGCT GGTCACGCTC
GGCAACCCGA AGATCATGCT GTTCTATCTC GCGCTGCTGC CGACGATCGT CGACCTGACG
CACGTCGGCG TCGTCGCGTG GGCCGAGCTC GTCGGCACGA TGCTCACGAT CTTGATCCTC
GCCGATTGCT TCTGGTCGCT GCTTGCTTCA CGTGCGCGCG CGTTTCTCAC TTCGGCACGC
GCGAAGCGGA TCGCGAACCG TACGAGCGCG ACCGCGATGG CGGGTGCGGC GGTGGCGATC
GCGACGCGCT GA
|
|---|
| Protein sequence | MTLSALAVFA IALLVTAGTP GPSVAALVAR VLTNGVRDVL PFLAAMWIGE ALWLTLAVAG
LSAFARTFAT GLLVLKLLGV AYLLFLAWKM WTAPTDAQAD DLPRGQSPWR MFVAGTLVTL
GNPKIMLFYL ALLPTIVDLT HVGVVAWAEL VGTMLTILIL ADCFWSLLAS RARAFLTSAR
AKRIANRTSA TAMAGAAVAI ATR
|
|---|
| |