| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4671 |
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| Symbol | |
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| ID | 6181291 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 1790103 |
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| End bp | 1791497 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641684430 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_001811341 |
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| Protein GI | 172063690 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTCG TTCGACTCGT GGCCGCGCTG TCCGCGGCGG CCGTCCTGAC TGCGTGCACG
AGCGCCCCGG TCGCCACCGT TTCGCCGCCG CCGCTGGCCG CGACCTATGC GAATGCCGAC
CTCGCGGCCA GCGGCCCGGC CGCCGACACC GGTGCGTGGT GGCACGGCTT TCACGATCCG
ATTCTCGACC GGCTGGTCGA CACGGCACTC GCGAACAACC TTGACCTGAA GGCCGCAGTC
GCGCGCATCG ACGCGGCACG CGCGGTGCGG ATCGGCGCGG CGTCGCAGCG GTTCCCGTCG
CTCGACCTGA ATGCGAGCGC CGGCCGCCAG CGGCTGTCCG CGTCGCAGGC GTTCCCGACC
GATACGCCGA CGACGGGCAA CGCGTTCGAC CTGAACGCGA GCCTCGCATG GGAAATCGAC
ATCTTCGGCC GCATCCGCCA GGGCGTCTCG GCTGCCGACG CGGACATGGC GTCCGCACAA
AACGATGCGG CGGCCGTGCG GATCGCAACG ATCGACGAAA CCGTGCGCAC CTATGTGACG
GTACGCGGAC TCGAACAGCG GCTCGCACTG GTCGAGGCCA ACGCTTTGAG CCAGCGCGGC
ACCGAGGAAT CGACGCGGCG TCTGTTCGAT GCGGGTGTCG TGCCGGTCGC CGACGTTGAC
CGCGCCGCCG CCCAGACGGA AACGACGCTG GCCGAGCTGC CCGCGCTGCA ATTGCAACGG
CAGGCTGCGA TCCACCGGCT GTCGATCATC ACCGCGTCGA CGCCGCAGGA CATCTACGCG
CGCGTCGACC CGCCCGCGCC GGGGCCGGTA TGGACGGCCG CCGCACCGGG CATCGGCACG
CCGGCCGACC TGCTGCGCCG CCGGCCCGAC GTGCGCGCGG CCGAGGCGCG CGTCGTCGCG
GCCTATGCGC GAATCGGCGT GGCCGAGGCC GACCTGAAGC CGCACCTGCA ACTGATCGGC
GTGATCGGCG CGGCGATCGA CGGCTTCTCC GGTGCCACAC TCGCGCGGTC GCTGGCGTGG
ATGGCAGGCG CCGGCGCGAG CGCACCGCTG TTCGACGGCG GGCGGCGGCG CAGCGTCGTC
GCGTTACGCA GTGCGCAGGC GGATCAGGCG CTCGCTGCAT ATCGTGCGAC AGTGCTGACG
GCGGTCAGCG ATGTCGAGAC GTCGGTAGCG GCGACTGCCC GCGATCACAG TCGCACCGAG
CGCCTCGAAC GCGCGGTGGC GAATGCGCGC GGCGCCTATA CGCAGATCAA CCAGTCGTGG
CACAGCGGCG AATCGGCGTT CATCGATACG CTGGAAGTGC AGCGTTCGCT GCTCGCGGCC
GAAGACTCAC TCGCGCAGGC ACGGACCGAC GAAGTGCTCA GCCACGTCAG GCTGATGAGT
GCGCTGGGGC AGTAG
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| Protein sequence | MKFVRLVAAL SAAAVLTACT SAPVATVSPP PLAATYANAD LAASGPAADT GAWWHGFHDP
ILDRLVDTAL ANNLDLKAAV ARIDAARAVR IGAASQRFPS LDLNASAGRQ RLSASQAFPT
DTPTTGNAFD LNASLAWEID IFGRIRQGVS AADADMASAQ NDAAAVRIAT IDETVRTYVT
VRGLEQRLAL VEANALSQRG TEESTRRLFD AGVVPVADVD RAAAQTETTL AELPALQLQR
QAAIHRLSII TASTPQDIYA RVDPPAPGPV WTAAAPGIGT PADLLRRRPD VRAAEARVVA
AYARIGVAEA DLKPHLQLIG VIGAAIDGFS GATLARSLAW MAGAGASAPL FDGGRRRSVV
ALRSAQADQA LAAYRATVLT AVSDVETSVA ATARDHSRTE RLERAVANAR GAYTQINQSW
HSGESAFIDT LEVQRSLLAA EDSLAQARTD EVLSHVRLMS ALGQ
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