Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_4663 |
Symbol | |
ID | 6179474 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | - |
Start bp | 1779316 |
End bp | 1780302 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641684422 |
Product | transketolase central region |
Protein accession | YP_001811333 |
Protein GI | 172063682 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3958] Transketolase, C-terminal subunit |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCTACTC CGCAAAATCC CGATTCGTGG CAGTACCGCG CGCTCAACGC GCGCAATCCC GGCCTCGACT ATCTGTCCGA TGCGCTCATC GATCTCGCGC GCGAAGGTCA TCCCGTCGTC GCCGGCTCCG CCGATCTCCA GTATTCGAAC GGCTTGAACA AGTTCGCCGG CGAATTCCCG GAGCGCTACG TGCAATTCGG CATCTCGGAG CAGAACATGG TTTCCGCCGC CGCCGGCATG GCGACCACGG GCCTCATGCC GTTCGTCGCG ACCTTCGCAT CGTTTCTCGG CCTGCTGTGC TGTGAGCAGA TCCGCATGGA TGTCGCGTAC TGCAAGCTGC CGGTGCGGCT CGTGGGTCAC CATACCGGCA TCTCGCTCGG CTTCTACGGT ACCTCGCACC ATGCAACGGA AGACATCTCG ACGATGCGCG CGATTGCGAA CCTGACCGTC ATTTCGCCCG CCGACGGCGC GCAGCTCGCC GCCGCGATCC GCGCGTCGGC CACGTGGCCC GACCCGATCT ACTTCCGCAT CGGACGCGGG CGGGATCCGA AAGTCTACGA GGATGGTGTC GAGTTCACGA TCGGCAAAGC CATCGTTCAT TCGGTGGGAC GCGATGTCAC CATCATCGGC TGCGGATTGC CGGTCGCCGG TGCACTCGAA GCGGCTGACA ATCTGAGGGC GGAAGGCATT TCGGCGGGCG TGATCGACAT GCCGACCATC AAGCCGCTCG ACCGCGACGC CATTATCGCG GCGGCGCGAC AGTCGAAGGT GCTCGTCACG GTCGAGGAGC ACAACGTGAT TGGCGGGCTG GGCGCGGCGG TGGCCGAGGT CCTGGCCGAC GAGGGGCTCG GCGTGCGACT CGTGCGGCAC GGAATCTACG ACGAGTACAG CCTGATCGCA CCGCCGACGC ATCTGTATGC GCACTACGAA CTCGACGGCC CCGGGATCAC CCGCGTTGCG CGAGCCGCGC TCGCGAAGGC GAGCTGA
|
Protein sequence | MSTPQNPDSW QYRALNARNP GLDYLSDALI DLAREGHPVV AGSADLQYSN GLNKFAGEFP ERYVQFGISE QNMVSAAAGM ATTGLMPFVA TFASFLGLLC CEQIRMDVAY CKLPVRLVGH HTGISLGFYG TSHHATEDIS TMRAIANLTV ISPADGAQLA AAIRASATWP DPIYFRIGRG RDPKVYEDGV EFTIGKAIVH SVGRDVTIIG CGLPVAGALE AADNLRAEGI SAGVIDMPTI KPLDRDAIIA AARQSKVLVT VEEHNVIGGL GAAVAEVLAD EGLGVRLVRH GIYDEYSLIA PPTHLYAHYE LDGPGITRVA RAALAKAS
|
| |