Gene BamMC406_4663 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_4663 
Symbol 
ID6179474 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp1779316 
End bp1780302 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content65% 
IMG OID641684422 
Producttransketolase central region 
Protein accessionYP_001811333 
Protein GI172063682 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3958] Transketolase, C-terminal subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTACTC CGCAAAATCC CGATTCGTGG CAGTACCGCG CGCTCAACGC GCGCAATCCC 
GGCCTCGACT ATCTGTCCGA TGCGCTCATC GATCTCGCGC GCGAAGGTCA TCCCGTCGTC
GCCGGCTCCG CCGATCTCCA GTATTCGAAC GGCTTGAACA AGTTCGCCGG CGAATTCCCG
GAGCGCTACG TGCAATTCGG CATCTCGGAG CAGAACATGG TTTCCGCCGC CGCCGGCATG
GCGACCACGG GCCTCATGCC GTTCGTCGCG ACCTTCGCAT CGTTTCTCGG CCTGCTGTGC
TGTGAGCAGA TCCGCATGGA TGTCGCGTAC TGCAAGCTGC CGGTGCGGCT CGTGGGTCAC
CATACCGGCA TCTCGCTCGG CTTCTACGGT ACCTCGCACC ATGCAACGGA AGACATCTCG
ACGATGCGCG CGATTGCGAA CCTGACCGTC ATTTCGCCCG CCGACGGCGC GCAGCTCGCC
GCCGCGATCC GCGCGTCGGC CACGTGGCCC GACCCGATCT ACTTCCGCAT CGGACGCGGG
CGGGATCCGA AAGTCTACGA GGATGGTGTC GAGTTCACGA TCGGCAAAGC CATCGTTCAT
TCGGTGGGAC GCGATGTCAC CATCATCGGC TGCGGATTGC CGGTCGCCGG TGCACTCGAA
GCGGCTGACA ATCTGAGGGC GGAAGGCATT TCGGCGGGCG TGATCGACAT GCCGACCATC
AAGCCGCTCG ACCGCGACGC CATTATCGCG GCGGCGCGAC AGTCGAAGGT GCTCGTCACG
GTCGAGGAGC ACAACGTGAT TGGCGGGCTG GGCGCGGCGG TGGCCGAGGT CCTGGCCGAC
GAGGGGCTCG GCGTGCGACT CGTGCGGCAC GGAATCTACG ACGAGTACAG CCTGATCGCA
CCGCCGACGC ATCTGTATGC GCACTACGAA CTCGACGGCC CCGGGATCAC CCGCGTTGCG
CGAGCCGCGC TCGCGAAGGC GAGCTGA
 
Protein sequence
MSTPQNPDSW QYRALNARNP GLDYLSDALI DLAREGHPVV AGSADLQYSN GLNKFAGEFP 
ERYVQFGISE QNMVSAAAGM ATTGLMPFVA TFASFLGLLC CEQIRMDVAY CKLPVRLVGH
HTGISLGFYG TSHHATEDIS TMRAIANLTV ISPADGAQLA AAIRASATWP DPIYFRIGRG
RDPKVYEDGV EFTIGKAIVH SVGRDVTIIG CGLPVAGALE AADNLRAEGI SAGVIDMPTI
KPLDRDAIIA AARQSKVLVT VEEHNVIGGL GAAVAEVLAD EGLGVRLVRH GIYDEYSLIA
PPTHLYAHYE LDGPGITRVA RAALAKAS