Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_4655 |
Symbol | |
ID | 6180676 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | - |
Start bp | 1769213 |
End bp | 1769935 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641684414 |
Product | GntR family transcriptional regulator |
Protein accession | YP_001811325 |
Protein GI | 172063674 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATGAAA ACATTTTTCG TCCCGTTATC AGAATGAAGC CACTCGCCCG TGTCGAAAAG AGCAATCTCT CGTCACGCAT CTACGAAGAG ATCCGCTCCC GATTAATGAA CGGTCAGTAC GCGCCTGGCG ACCGACTGCG TATCAACGAC CTTGCCGAAA AGCTCGGCAC GAGCATCACG CCGGTGCGCG AAGCGATTTT CCGCCTGGTC AGTGAACAGG CCCTGGAAAT GACTGCGGCA ACCTCGATCG TGGTGCCGGT GCTCGACGCC GATACCGTTG CGGAGATTCA GCTCATGCGG CGCCTTCTCG AGGGTGCGGC GGCCGAACAG GCGGCGCAGC GCATTACCCC AAAGGAAATC CGCCATCTGA GCCTGACGCA CGACGAGTTC ATCGAGGCCG TTGCCGCGAG CCCTTCAGAG GCTGCGGAGC GCAATCGCGA CTTCCATTTC GAATTGATGG CGGCAGCCAG GATGCCCACG CTCAGCGCCA CCGTGGAAAC CATGTGGGTC CGGATGGGGC CGCTGCTGCA CACGTTTCAT TCGCATCTGC CACGGCGCGA GATATCGAAT CGTTCGCACC CTCACTATCG CGTGCTGGCC GCGCTGCGCA AGGGTGATCC AGAAGGGGCA TCGCGAGCGA TCCAGGAAGA TATCGAATGG GGCCAGCGCG TGCTGCTCGA ATGGATGGCC GAGCGGGAGC ATGGCGAAGT CGCCGCTACG TAA
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Protein sequence | MHENIFRPVI RMKPLARVEK SNLSSRIYEE IRSRLMNGQY APGDRLRIND LAEKLGTSIT PVREAIFRLV SEQALEMTAA TSIVVPVLDA DTVAEIQLMR RLLEGAAAEQ AAQRITPKEI RHLSLTHDEF IEAVAASPSE AAERNRDFHF ELMAAARMPT LSATVETMWV RMGPLLHTFH SHLPRREISN RSHPHYRVLA ALRKGDPEGA SRAIQEDIEW GQRVLLEWMA EREHGEVAAT
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