Gene BamMC406_4655 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_4655 
Symbol 
ID6180676 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp1769213 
End bp1769935 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content61% 
IMG OID641684414 
ProductGntR family transcriptional regulator 
Protein accessionYP_001811325 
Protein GI172063674 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATGAAA ACATTTTTCG TCCCGTTATC AGAATGAAGC CACTCGCCCG TGTCGAAAAG 
AGCAATCTCT CGTCACGCAT CTACGAAGAG ATCCGCTCCC GATTAATGAA CGGTCAGTAC
GCGCCTGGCG ACCGACTGCG TATCAACGAC CTTGCCGAAA AGCTCGGCAC GAGCATCACG
CCGGTGCGCG AAGCGATTTT CCGCCTGGTC AGTGAACAGG CCCTGGAAAT GACTGCGGCA
ACCTCGATCG TGGTGCCGGT GCTCGACGCC GATACCGTTG CGGAGATTCA GCTCATGCGG
CGCCTTCTCG AGGGTGCGGC GGCCGAACAG GCGGCGCAGC GCATTACCCC AAAGGAAATC
CGCCATCTGA GCCTGACGCA CGACGAGTTC ATCGAGGCCG TTGCCGCGAG CCCTTCAGAG
GCTGCGGAGC GCAATCGCGA CTTCCATTTC GAATTGATGG CGGCAGCCAG GATGCCCACG
CTCAGCGCCA CCGTGGAAAC CATGTGGGTC CGGATGGGGC CGCTGCTGCA CACGTTTCAT
TCGCATCTGC CACGGCGCGA GATATCGAAT CGTTCGCACC CTCACTATCG CGTGCTGGCC
GCGCTGCGCA AGGGTGATCC AGAAGGGGCA TCGCGAGCGA TCCAGGAAGA TATCGAATGG
GGCCAGCGCG TGCTGCTCGA ATGGATGGCC GAGCGGGAGC ATGGCGAAGT CGCCGCTACG
TAA
 
Protein sequence
MHENIFRPVI RMKPLARVEK SNLSSRIYEE IRSRLMNGQY APGDRLRIND LAEKLGTSIT 
PVREAIFRLV SEQALEMTAA TSIVVPVLDA DTVAEIQLMR RLLEGAAAEQ AAQRITPKEI
RHLSLTHDEF IEAVAASPSE AAERNRDFHF ELMAAARMPT LSATVETMWV RMGPLLHTFH
SHLPRREISN RSHPHYRVLA ALRKGDPEGA SRAIQEDIEW GQRVLLEWMA EREHGEVAAT