| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4654 |
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| Symbol | |
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| ID | 6180675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 1768425 |
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| End bp | 1769120 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641684413 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001811324 |
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| Protein GI | 172063673 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAAAG TTGCTGTAGT AACGGGGGGC GGCACCGGCA TCGGTCGCGC GATCGCCGAA
GAATTCTTGC GTGCGGGCCT GCGCCCCGTG TCCGTCGGAA AGGACGCCGA CGAGGATCTC
GATCCGGCGA TCGCGTTCCG GCGAGTCGAC GTGACGTCAG CCGCTGAAGT TCGCGACGCA
TTCGGCGATC TTGCGCAGAT TCACGTGCTC GTCAACGCCG CCGGAATCAT CCTCCACGAC
CGCGCGGAGT TCGATTCAGC GGGCTTTCGA AAAGTGGTCG ACGTCAATCT GAACGCCTGC
CAGCTCACGA CCGAAGTCGC GCTCGACAAG CTGTCCGCGG TGCGCGGCTG CGTCGTCAAT
ATCGCATCGA TGTGGAGCTT TTTCGGCTCG GCCCGCAATC CTGCCTATAC GGCAAGCAAG
GCCGGCCTCG TTGGCTTGAC GCGCGCGCAC GCCGCTGCGT TCGCGGATCG CGGGGTGCGC
GTCAATGCAG TGGCGCCCGG CTGGATCGAA ACGCGACTGT CTGCCGGAGC GCTGAACAAC
CCCGAGCGCA GCGGTTCGAT TCGCGCACGT CTGCCGCTCG GGCGCTGGGG GCAGCCTTCG
GATGTCGCCA GGGGCGTGAA ATTCCTTTGC TCGGCCGATG CGGACTACAT CACGGGAGTC
GTCCTTCCGA TCGACGGCGG ATTCAGCATC GCGTGA
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| Protein sequence | MTKVAVVTGG GTGIGRAIAE EFLRAGLRPV SVGKDADEDL DPAIAFRRVD VTSAAEVRDA
FGDLAQIHVL VNAAGIILHD RAEFDSAGFR KVVDVNLNAC QLTTEVALDK LSAVRGCVVN
IASMWSFFGS ARNPAYTASK AGLVGLTRAH AAAFADRGVR VNAVAPGWIE TRLSAGALNN
PERSGSIRAR LPLGRWGQPS DVARGVKFLC SADADYITGV VLPIDGGFSI A
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