| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4640 |
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| Symbol | |
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| ID | 6179344 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 1752943 |
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| End bp | 1753683 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641684399 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001811310 |
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| Protein GI | 172063659 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.384242 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCAAA CTTCCGAAAA GGTTGCCCTG GTTACCGGTT CCTCGCGCGG CATCGGCGCC
GATATCGCGG TTCGCCTCGC GCGCGATGGC TTCAAGGTCG TCGTGAACTA TGCCAGCAAC
GCGACGCCGG CCGAGGAAGT CGCCGCAACG ATTCGCGAGA ACGGCGGCGA CGCGTTGCTC
GTCAAGGCCG ACATCGCCGA TCCGGCCGCG ACCATCGCGA TGTTTGGCGC GACGGAGAAG
GCCTATTGCG GCGTCGACGT CGTCGTCAAC AGCGCAGGCG TCATGAACCA GGCAAAGATC
GCGGATTTCG ACGATGCAAC GTTCGATCGC ACGGTCGCCA TCAACTTCAA GGGCGCGTTC
AACGTGTCGC GCGAAGCCGC GCGCCGCGTT CGCGACGGCG GCCGGATCAT GAACCTGACG
ACGAGCGTGA CCGGCGTGCG CTTGCCGACG TATGCCGTCT ATATCGCGAC GAAGTGCGCG
GTCGAGGGAC TGACTCAGGT GCTCGCCCAG GAGCTCCGCG GACGCGGCAT CAGCGTCAAC
GCCGTGGCGC CGGGCCCCGT TGCCACCGAG CTGTTCCTCG CCGGCAAGAG CGCCGAGCTC
ATCGATCGGA TGGCGAAGAT GAATCCGCTC GAACGGTTGG GGCAGCCGTC GGACATTTCA
GCCGTCGTCG CGTTTCTCGC CAGCCCCGAA GGCGCGTGGA TCAACGGCCA GATCGTACGT
GCGAACGGCG GCATGTGCTG A
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| Protein sequence | MIQTSEKVAL VTGSSRGIGA DIAVRLARDG FKVVVNYASN ATPAEEVAAT IRENGGDALL
VKADIADPAA TIAMFGATEK AYCGVDVVVN SAGVMNQAKI ADFDDATFDR TVAINFKGAF
NVSREAARRV RDGGRIMNLT TSVTGVRLPT YAVYIATKCA VEGLTQVLAQ ELRGRGISVN
AVAPGPVATE LFLAGKSAEL IDRMAKMNPL ERLGQPSDIS AVVAFLASPE GAWINGQIVR
ANGGMC
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