| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4623 |
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| Symbol | |
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| ID | 6179429 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 1734070 |
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| End bp | 1735734 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641684382 |
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| Product | cytochrome-c oxidase |
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| Protein accession | YP_001811293 |
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| Protein GI | 172063642 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3278] Cbb3-type cytochrome oxidase, subunit 1 |
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| TIGRFAM ID | [TIGR00780] cytochrome c oxidase, cbb3-type, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.741778 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.965901 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTTCA CGATTGGCAC GCTGCTCGCG TTGTCGTTTC TGATCTCCGT GCTCGGGCTG
TTCCTGTTCC TTTGGGCGCA AATGAACGGC CTGATGCGGG CCGGCCCCGA TGCAGCCGAG
GCCATCTTCG CCCCGGGGGA AGTCGGACAG ACGGAAGATC CGGCCCTGTC CGCATCGCAA
CGCGAGCGCC TCCAGCAGGC CGCCGCGCAT GTGGCGCCCG GCACACGTTC CGGCGCATCG
AGCGACGCGC CGGCACTCGG CCGGGAACTC GCGGAACGCG CGCGGCTCGA CGCGTCGAGC
CGCGGACCGA CCTTCGTCTT TCTGAGCTCC TCGGTGTTCT GGCTGCTGCT GGGCTCCATT
GCGGGCCTCG TCGCGTCGCA GAAGCTGACC ACCCCCGACT TTCTCACGCA GTCGGCCTGG
CTCACGTTCG GCCGCGTGCG CACCGCGCAT CTGAATATGG TGGTATACGG ATGGGCGTCG
ATGGCAGGCA TCGGCATTGC CCTCTGGATG CTGCCGCGCC TGCTCAAGAC ACAGCTGACG
GGCGGCCGCT ACGCCATCGC CGGCGCGTGG CTCTGGAATG CCGGCCTCTC CGCGGGCATC
GCCGCCATTC TGTCGGGATG GACCGACGGG CTGCAATGGC TCGAGATTCC GTGGCAAATC
GGCATCCTGC TCGCGGCGGG CGGCGCGCTC GCGGCCGTGC CGCTCCTCAT GACCATCGCA
CGGCGCACCA CGCGCCATCT GTACGTGTCG GTGTGGTATC TCGCCGCCGC GCTGCTGTGG
TTCCCCATCC TCTACATCGT CGCCAAGGTG CCGGGCGTGC ACTTCGGCGT CGAGCAGGCC
ATCGTCAACT GGTGGTTCGC GCACAACGTG CTCGGCCTGT GGCTCACGCC GATCGGCCTG
GCCGCAGCCT ATTACTTCAT CGCGAAGGTG CTCGGGCGGC CCATCTACTC GTACGCGCTC
TCGCTCGTCG GCTTCTGGGC CCTGGCCATG TTCTACAGCC AGGCCGGCAT TCACCACCTG
CTGGGCGGCC CGGTTCCGCA ATGGCTGCAG AGCGTGTCGG TCGTCCAGAG CGTGATGATG
ATCGTCCCGG TGCTCGCCGT CGGCGTGAAC CACCATATGA CGGTGGCCGG CCACTTCGGC
GCGCTGAAAC ACTCGCCTAC CCTGCGCTTC GTCGTGCTGG GCGCCGTGCT GTACACGCTC
GTGTCGCTGC AGGGGTCGCT CGAGGCGCTG CCGTTCTTCA ACCGGCTCGT GCATTTCACG
CAGTACAAGG TGGCCCATGC CCATCTCGGC CTGTACGGCT TCTTTTCGAT GATCATGTTC
GGCTCGATCT ACTTCACGAT GCCACGCGTG CTCGAACGCG AATGGCCGTA CCCGAAGCTC
GTCTGGCTCC ACTTCTGGCT CGCCGCCGTC GGCTTTGCCA TCTACTTCGT CTCGCTCACG
ATCGGCGGCG TTCTGCAAGG CATCGCACTG CTCGATCCCG CGCGGCCGTT CATGGCATCC
GTCGAAGTTC TCACGCCATA TCTGCAAGCA CGCACGCTCG GCGGCGCGCT CATGACGATC
GGCCATTTCG TATTCGCGTA TCACTTCTTC GCGCTCGTCT TCGGCCGGCA AGGTGCGCGC
TCAGACGCGG CGCCGGCGCG CCACGCGATC TCGATGGGGG CATGA
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| Protein sequence | MNFTIGTLLA LSFLISVLGL FLFLWAQMNG LMRAGPDAAE AIFAPGEVGQ TEDPALSASQ
RERLQQAAAH VAPGTRSGAS SDAPALGREL AERARLDASS RGPTFVFLSS SVFWLLLGSI
AGLVASQKLT TPDFLTQSAW LTFGRVRTAH LNMVVYGWAS MAGIGIALWM LPRLLKTQLT
GGRYAIAGAW LWNAGLSAGI AAILSGWTDG LQWLEIPWQI GILLAAGGAL AAVPLLMTIA
RRTTRHLYVS VWYLAAALLW FPILYIVAKV PGVHFGVEQA IVNWWFAHNV LGLWLTPIGL
AAAYYFIAKV LGRPIYSYAL SLVGFWALAM FYSQAGIHHL LGGPVPQWLQ SVSVVQSVMM
IVPVLAVGVN HHMTVAGHFG ALKHSPTLRF VVLGAVLYTL VSLQGSLEAL PFFNRLVHFT
QYKVAHAHLG LYGFFSMIMF GSIYFTMPRV LEREWPYPKL VWLHFWLAAV GFAIYFVSLT
IGGVLQGIAL LDPARPFMAS VEVLTPYLQA RTLGGALMTI GHFVFAYHFF ALVFGRQGAR
SDAAPARHAI SMGA
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