| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4619 |
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| Symbol | |
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| ID | 6179729 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 1727482 |
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| End bp | 1729671 |
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| Gene Length | 2190 bp |
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| Protein Length | 729 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641684378 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_001811289 |
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| Protein GI | 172063638 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAATC GGACAATAGG CAAGCCATGG CGAGAAGACG CGCGTGTGTT GTACACGTTG
GCCGGTACAC TGACGGCGCT TATTTTCATT ATCGACGTGA CGCCGCTCGA TATCGCGATT
GCAGTGCTTT ACGTGGCGGT GGTGCTGCTG GCCGCGTCAG CCGGCTCGCG TCGGGCGACG
TATGTCGCCG CATGCGGATG CGTGGGACTG ACGTTGCTCG CGCTTGCGCT GTCGCATGAC
GCACGATATT CCGGCGGTGC GCTCGCCCGC TGCGGCGTAA GCCTGCTCGC GATCTTGACG
ACCGCAGTGT TGTCGCTACG CAATCTCGCC AACACCGGCA TTCTGCGCGA GCGGCTTCAG
TTGCTCGATC TGACTCATGA CGCGATCGTC GTTTACGACT TGCAGGACCG GATCGCATTC
TGGAATCAAG GCGCGGAGGC GCTTTACGGC TGGACGGCCG AACAGGCGCT CGGCCAGCCG
GTCCATATGC TGACGCAGAC CGTCGCGTCG GTGCCGCTCG ACGACATTCA CCGTGCCGTA
CTCGAATGCG GACAGTGGCA GGGCGAACTG CAGCGTGTCC GCAAGGACGG CAAAAAGGTG
ATGATTTCGA GTCGACTCGC GCTGTGGCGC GATGCCGGCG GAAAGCCGGT TGCGATACTC
GCGACCAACA ATGACATTAC CGACCGCAAG CGCCTGGAAG GCGAAATGCG GCGGCAGCAG
GACGAGTTGC GCGCGATGAT CGACGCAATT CCCGCAATGG TGTGGAGCTC GGACAGTAAC
GGCAAGATCG ACTACGTGAA CCAGCGGTGG ACGGAGTTCG GTGTGTACAT GGCCAAGCGC
GAAGAAGATA TCTGGCGTGC CGTCGTCCAT CCCGACGACT TCGATACGAT GCAGCACGCG
TGGGAGCGCG CCGTGGGCAA CGAGTCACGG TTCGAGAGCA GCGTTCGGAT CAGGCGCGAG
GACGGCGTTT ACCGGTGGGT GCATATCCGC GCGGCGCCGC TTCGTGACGA GAGCGGGCGT
GTCGTTCGCT GGTATGGCGT GAATACCGAC ATCGAGGCAC GCAAGCAGGC CGAACAGGCG
TGGCGCCGCA GCGAGGCATT TTTATCGGGC GCGCAGCGGC TGAGTCATAC CGGCAGTATT
GCGATGAGGC TTCCCGACTG TACGATGTGG TGGTCCGACG AGACGTATCG CATCTTCGAA
CTCGATCGCC ACAGAGTGCC GGATTTCGAA TCGATTGCGT CGCGCGTCCA CCCCGACGAC
GTATCGCTTG TCCGCGATGC CTGGCATTGC CAGATCGCAG GCGCGTCGGA TCCGGACATC
AAGTTTCGAC TGCTGATGAC CGATGCCCGC GTCAAACACG TCCATTACGT CGCGCATCCG
ATCCGACATC AAAAGGAAAC GGAATACGTC GGCGCATTGA TGGACATCAC CGAGCGCGTC
GTCGCGCAGG AAGCGCTGGA TCGATCGAAT GCCGAACTGG CGCACGCGAC GCGGGTAACG
ATGCTGGGCG AATTGGCCGC ATCGATTGCT CATGAAGTCA CGCAGCCGCT TGCCGCGATC
GTCACCGCGG GTGACGCTGC ATTGCGCTGG ATCGACCGTC CGGAGCCCGA TCTGGGCGAG
GTACAGCAAT CCGTCGCCCA GATGATCCGC GACGCCAAGC GCGCCTCCGA CATCATCCGA
CAGATCCGGG CGATGGCGAG AAAGCGCGCG CCCGAGCAGC TGCCGCTCGA CCTGAACGAC
GTTGTGCGAG AATCGCTCGA ACTCGTCGCG CGAGAGCTGG AAACCCACCG GGTGGACGTA
GAGGCTGACT ATTCCGCTTC GCCACAGCGT GTGTGCGGCG ACCGCGTCCA GTTGCAGCAA
GTCGTCATCA ATCTGGTGAT GAACGCGATA CAAGCGATGT CGGGGCTCGC CCCGGGCACG
CGCCGCTTGC TGCTTCGCAC CCGAGCGCGG GACGGTCACG CTCACATGAT GGTGGAGGAC
CAGGGGGCCG GGGTAAGCAG CGAAGACTTC GGCCGGCTGT TCAGCGTATT CTTCACGACG
AAACAGAATG GGATGGGTAT GGGGTTGTCG ATTTGCCGGT CGATAGTGGA AGCGCATGGT
GGCCGTATCT GGGCCGAGAT CCCGGAGCGG GCCGGAATGG TCATACAGTT CGTATTGCCA
CTGGATGAGG AAATGTGTAA TGAACACTGA
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| Protein sequence | MSNRTIGKPW REDARVLYTL AGTLTALIFI IDVTPLDIAI AVLYVAVVLL AASAGSRRAT
YVAACGCVGL TLLALALSHD ARYSGGALAR CGVSLLAILT TAVLSLRNLA NTGILRERLQ
LLDLTHDAIV VYDLQDRIAF WNQGAEALYG WTAEQALGQP VHMLTQTVAS VPLDDIHRAV
LECGQWQGEL QRVRKDGKKV MISSRLALWR DAGGKPVAIL ATNNDITDRK RLEGEMRRQQ
DELRAMIDAI PAMVWSSDSN GKIDYVNQRW TEFGVYMAKR EEDIWRAVVH PDDFDTMQHA
WERAVGNESR FESSVRIRRE DGVYRWVHIR AAPLRDESGR VVRWYGVNTD IEARKQAEQA
WRRSEAFLSG AQRLSHTGSI AMRLPDCTMW WSDETYRIFE LDRHRVPDFE SIASRVHPDD
VSLVRDAWHC QIAGASDPDI KFRLLMTDAR VKHVHYVAHP IRHQKETEYV GALMDITERV
VAQEALDRSN AELAHATRVT MLGELAASIA HEVTQPLAAI VTAGDAALRW IDRPEPDLGE
VQQSVAQMIR DAKRASDIIR QIRAMARKRA PEQLPLDLND VVRESLELVA RELETHRVDV
EADYSASPQR VCGDRVQLQQ VVINLVMNAI QAMSGLAPGT RRLLLRTRAR DGHAHMMVED
QGAGVSSEDF GRLFSVFFTT KQNGMGMGLS ICRSIVEAHG GRIWAEIPER AGMVIQFVLP
LDEEMCNEH
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