Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_4611 |
Symbol | |
ID | 6179851 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 1716103 |
End bp | 1717002 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641684371 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001811282 |
Protein GI | 172063631 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTCTC TGTTGCGTAC CCTCCGGTTC CCGCCGCTCA ATGCGCTTCG CGCGTTCGAG GCGGCGGCGC GTCACCTCAA TTTCCGGCTG GCCGCCGACG AACTCGGCGT GACCCAGGGT GCGGTCGCGC AGCAGGTCAG GCATCTGGAG GACGTCGTGG CGGTTCAGCT GTTTCGACGC TTGCCCAGGG GACTTGCGCT GACGCGCGAA GGGCTCGAGT ATTTTTCGTC GGTCCAGCGC GCGCTGCAGA TCATCTCCGA CGCCACGGAC GCCCTTGGCC AGCGTCCTAC GGTGCTGGCT GTCAGCACGA CGCCGTCGTT CGCGTCGAAG TGGCTGATCC CGCGCCTGAC GGACTTCGGC CGGCTGCATC CCGACATCGA GGTTCGCGTC ATCGCCGACG AAAGGCTCGC GTCGTTTCGG GCCGACGGCG TCGACATCGC GATTCGACTC AGCAAGCCGC CATTCCCGGC CGGCCTGGCT GCGGAGTTGC TGGCTCCGCT CGACATATTC GCCGTCGCCA GCCCGAAGCT GCTCGACAGC GGCCCGCCAA TTCGCACGCC CGCGGACTTG TCGATGCATG CGCTGTTGCA CGACGCGCAC GATCTGTGGC CCGAATTCCT GGAGAAGCTC GGCGGAACGG GTCAGGCCGA TCCGACGAAA GGGCCGAGAT TCAGCCAGTC GCTGCTCGCG ATCGACGCCG CGGTCGCGGG TCAAGGCATC GCGCTGACCG GCGAGCCGCT CGTCGAGCGC GACATCGCGG AAGGCAGACT GCGCCGCGTG TTCGATTTTT CGTTTCCGAT GTCGCTCGGG TTTTACGTCG TCTTCCCGCA GGCCAATGCG CATTCGGAAG CGTTGCAGGC CATGCGGCGC TGGCTGTTTG CGCAGTATGG GAAAGCGTGA
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Protein sequence | MNSLLRTLRF PPLNALRAFE AAARHLNFRL AADELGVTQG AVAQQVRHLE DVVAVQLFRR LPRGLALTRE GLEYFSSVQR ALQIISDATD ALGQRPTVLA VSTTPSFASK WLIPRLTDFG RLHPDIEVRV IADERLASFR ADGVDIAIRL SKPPFPAGLA AELLAPLDIF AVASPKLLDS GPPIRTPADL SMHALLHDAH DLWPEFLEKL GGTGQADPTK GPRFSQSLLA IDAAVAGQGI ALTGEPLVER DIAEGRLRRV FDFSFPMSLG FYVVFPQANA HSEALQAMRR WLFAQYGKA
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