Gene BamMC406_4611 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_4611 
Symbol 
ID6179851 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp1716103 
End bp1717002 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content66% 
IMG OID641684371 
ProductLysR family transcriptional regulator 
Protein accessionYP_001811282 
Protein GI172063631 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTCTC TGTTGCGTAC CCTCCGGTTC CCGCCGCTCA ATGCGCTTCG CGCGTTCGAG 
GCGGCGGCGC GTCACCTCAA TTTCCGGCTG GCCGCCGACG AACTCGGCGT GACCCAGGGT
GCGGTCGCGC AGCAGGTCAG GCATCTGGAG GACGTCGTGG CGGTTCAGCT GTTTCGACGC
TTGCCCAGGG GACTTGCGCT GACGCGCGAA GGGCTCGAGT ATTTTTCGTC GGTCCAGCGC
GCGCTGCAGA TCATCTCCGA CGCCACGGAC GCCCTTGGCC AGCGTCCTAC GGTGCTGGCT
GTCAGCACGA CGCCGTCGTT CGCGTCGAAG TGGCTGATCC CGCGCCTGAC GGACTTCGGC
CGGCTGCATC CCGACATCGA GGTTCGCGTC ATCGCCGACG AAAGGCTCGC GTCGTTTCGG
GCCGACGGCG TCGACATCGC GATTCGACTC AGCAAGCCGC CATTCCCGGC CGGCCTGGCT
GCGGAGTTGC TGGCTCCGCT CGACATATTC GCCGTCGCCA GCCCGAAGCT GCTCGACAGC
GGCCCGCCAA TTCGCACGCC CGCGGACTTG TCGATGCATG CGCTGTTGCA CGACGCGCAC
GATCTGTGGC CCGAATTCCT GGAGAAGCTC GGCGGAACGG GTCAGGCCGA TCCGACGAAA
GGGCCGAGAT TCAGCCAGTC GCTGCTCGCG ATCGACGCCG CGGTCGCGGG TCAAGGCATC
GCGCTGACCG GCGAGCCGCT CGTCGAGCGC GACATCGCGG AAGGCAGACT GCGCCGCGTG
TTCGATTTTT CGTTTCCGAT GTCGCTCGGG TTTTACGTCG TCTTCCCGCA GGCCAATGCG
CATTCGGAAG CGTTGCAGGC CATGCGGCGC TGGCTGTTTG CGCAGTATGG GAAAGCGTGA
 
Protein sequence
MNSLLRTLRF PPLNALRAFE AAARHLNFRL AADELGVTQG AVAQQVRHLE DVVAVQLFRR 
LPRGLALTRE GLEYFSSVQR ALQIISDATD ALGQRPTVLA VSTTPSFASK WLIPRLTDFG
RLHPDIEVRV IADERLASFR ADGVDIAIRL SKPPFPAGLA AELLAPLDIF AVASPKLLDS
GPPIRTPADL SMHALLHDAH DLWPEFLEKL GGTGQADPTK GPRFSQSLLA IDAAVAGQGI
ALTGEPLVER DIAEGRLRRV FDFSFPMSLG FYVVFPQANA HSEALQAMRR WLFAQYGKA