| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4604 |
|---|
| Symbol | |
|---|
| ID | 6181156 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010552 |
|---|
| Strand | - |
|---|
| Start bp | 1709108 |
|---|
| End bp | 1710454 |
|---|
| Gene Length | 1347 bp |
|---|
| Protein Length | 448 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641684364 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001811275 |
|---|
| Protein GI | 172063624 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.988663 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.150792 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAATT CGACCGTTAT CAACGCCCCC GTCAAGACGT CCCAGCCGCT GCAGCCGCCG
CGCCTCGGCG AGGAAATCCT GCGTGTCGAT CACGTCTGCC GCGGCTTCAA CAAGACGCAG
GGCGAACTGC TGGTGCTCGA CGACGCGAAC CTGTCGCTGC GCGAAGGCGA GATCGTCGGG
CTGCTCGGCC GTTCGGGCTC GGGCAAGTCG ACGCTGCTGC GGATCATCGC CGGGCTGATC
GAGCCGACCG GCGGTGAAGT GACGTATCTC GGCAAGCCGC TGCGCGGCCC GGCCGAAGGC
GTCGCGATGG TGTTCCAGAC CTTCGCGCTG TTCCCGTGGC TGACCGTGTT GCAGAACGTG
GAAGCCGGGC TGGAAGCGCT GGGCGTCGGC GCACGCGAGC GGCGCGAGCG CGCGCTCGCC
GCGATCGACC TGATCGGTCT CGACGGCTTC GAGAACGCGT ATCCGCGCGA GTTGTCGGGC
GGCATGCGCC AGCGCGTGGG CTTCGCGCGC GCGCTCGTCG TCGATCCGAC GATCCTGCTG
ATGGACGAGC CGTTCTCCGC ACTCGACGTG CTGACGGCCG AAACGCTGCG TACCGACCTG
CTGGACCTGT GGACGCAAGG CCGGATGCCG ATCAAGTCGG TGCTGATCGT CACGCACAAC
ATCGAGGAAG CGGTGTTCAT GTGCGACCGG ATCCTGGTGC TGTCGTCCAA CCCGGGCCGC
GTGATCGCCG AGATCAAGGT GCCGTTCAAG CATCCGCGCA ACCGTCTCGA CCCGGCCTTT
CGCAAACTGG TCGACGACAT CTACGCGAAG ATGACCGCGC GCCAGACCGG CGAGGCGACG
AAGAAGGGGC TGGAGCTCGG CAGCTGGCTG CCGCAGGTGT CGACCAACCT GATGGCCGGC
CTGATCGAGA CGCTCGCGAT GGCGCCGTAC CACGGCCGCG CGGACATGCC GGAAATCGCG
CGCACGCTGC ATCTGGAAGT GGACGACCTG TTCCCGATCG CCGAAGTGCT GCAGTACCTT
GGTTTCGCCG ACGTGCGGGA AGGGGACGTG TTCCTGACGC CGCCGGGGCG CGTGTTCGCG
GAGTTCGGCA CGCAGGAGCG CAAGCTGATG TTCGCGGATC ACTTGCTCAA GCACGTGCCG
CTCGCCGCGC GGATCAAGAA GGTGCTGAAC GAGCGCCCGG GCCATCGCGC GCCGCGCGTG
CGCTTCGAGC AGGAGCTGGA GGATTTTCTG TCGGACGGTG CGGCCGAGGA AACGCTCGAT
GCGGTGATCG ATTGGGGGCG TTACGGCGAA GTATTTTCGT ATAACGACAA GACGGAAGTA
TTCAGTCTTG AGGATGTGGA GTCGTGA
|
|---|
| Protein sequence | MQNSTVINAP VKTSQPLQPP RLGEEILRVD HVCRGFNKTQ GELLVLDDAN LSLREGEIVG
LLGRSGSGKS TLLRIIAGLI EPTGGEVTYL GKPLRGPAEG VAMVFQTFAL FPWLTVLQNV
EAGLEALGVG ARERRERALA AIDLIGLDGF ENAYPRELSG GMRQRVGFAR ALVVDPTILL
MDEPFSALDV LTAETLRTDL LDLWTQGRMP IKSVLIVTHN IEEAVFMCDR ILVLSSNPGR
VIAEIKVPFK HPRNRLDPAF RKLVDDIYAK MTARQTGEAT KKGLELGSWL PQVSTNLMAG
LIETLAMAPY HGRADMPEIA RTLHLEVDDL FPIAEVLQYL GFADVREGDV FLTPPGRVFA
EFGTQERKLM FADHLLKHVP LAARIKKVLN ERPGHRAPRV RFEQELEDFL SDGAAEETLD
AVIDWGRYGE VFSYNDKTEV FSLEDVES
|
|---|
| |