| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4602 |
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| Symbol | |
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| ID | 6180735 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 1707852 |
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| End bp | 1708730 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641684362 |
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| Product | RpiR family transcriptional regulator |
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| Protein accession | YP_001811273 |
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| Protein GI | 172063622 |
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| COG category | [K] Transcription |
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| COG ID | [COG1737] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0499113 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0896599 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGACAA GCATCAGGGC GTTGCTGCTA TCCCAGATGG ATAGCTTCAC GCCGTCGGAA
CAGAAGGTCG CGCATGCGCT GCTGGATCGC TATCCGAGCC TCGGTCTCGG GCCGATCGCG
AGCTTTGCGA AGCAAGCCGA AGTCAGCGAC CCGACCGTGT TTCGCTTCGT CGTGCGGATC
GGCTTTCCGA ACTACTCGTC GTTCCAGCAG GCGTTGCACG ACGAGATCGA TACCGCGATG
AATTCGCCGC TCGCGCGGAT GGATGCGTTC CACTCGGAAT CGGGGATGCG CGACAGTAAT
TCGGCGATCT TCCAGCGGCT CTCGCAAGCG CTCGCCACGA CGATCGACGA GCTCGACGCG
GCGGCGTTCG ACGAAGCGGT GACGCTGCTG GCCGATCCGG GCCTTCGCGT GTTCTGCGGC
GGCGGTCGTT ACACCGCGCC GCTCGCGTCG CTGTTTTCCT TCACGCTCGC GTATGCGCGT
CCGCATGTGC AGTACGTCGA GCCGAACGTG AATCTCGCGT CGGTCACGCT GACGGACATG
GGGCCCGCCG ACGTGCTGGT CATTTTCGAT TTTCGCCGCT ATCAGAAGGA CAGCATCCGG
TTCGCGCAGG CTGCGCATCA GCTCGGCGTC AAGGTGCTGC TGATTACCGA CGAATGGCGC
TCGCCGATCA GCGCATTCGC CGAGATCGTG CTGCGGATTC AGGGACGCCC GTTCGCGATG
CTGCAGACGA ACGTGCCCGC GCTCGCGCTC GCCGAAGCGC TGGTGATCGG CGTGACGAAC
CGGCTTCCCG AGCTGGCGCG GCAGCGGATG GAGAAGATCG AGCGGCTGAG TACGGGTGGG
GTCGAGCGGG ATGCGAATCA GTGGGATTTG CCGGAGTAG
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| Protein sequence | MGTSIRALLL SQMDSFTPSE QKVAHALLDR YPSLGLGPIA SFAKQAEVSD PTVFRFVVRI
GFPNYSSFQQ ALHDEIDTAM NSPLARMDAF HSESGMRDSN SAIFQRLSQA LATTIDELDA
AAFDEAVTLL ADPGLRVFCG GGRYTAPLAS LFSFTLAYAR PHVQYVEPNV NLASVTLTDM
GPADVLVIFD FRRYQKDSIR FAQAAHQLGV KVLLITDEWR SPISAFAEIV LRIQGRPFAM
LQTNVPALAL AEALVIGVTN RLPELARQRM EKIERLSTGG VERDANQWDL PE
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