| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4598 |
|---|
| Symbol | |
|---|
| ID | 6180976 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010552 |
|---|
| Strand | + |
|---|
| Start bp | 1702542 |
|---|
| End bp | 1703843 |
|---|
| Gene Length | 1302 bp |
|---|
| Protein Length | 433 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641684358 |
|---|
| Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
|---|
| Protein accession | YP_001811269 |
|---|
| Protein GI | 172063618 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1252] NADH dehydrogenase, FAD-containing subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.574175 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.0132021 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAACCC TTACTCGCCC TGCCCGCATC GTCATCGTCG GCGGCGGAAT CGCCGGCTTG
CAGCTCGCGA CCCGCCTCGG CGAACGCCTT GGCCGTAGCG GGCGCGCGCA GGTCACCGTC
GTCGACCGCA GCCCGACCCA CGTGTGGAAG CCGATGCTGC ACACGATCGC TGCCGGCACG
CGCGACCTGC AGCAACAGCA GGTGATCTTC CTCGCCCACG CGCGCGACCA CGGCTACACG
TACCAGCCCG GCGAATTGAA GGGGCTCGAT CGCGCGCGCC GCCGCGTACA GCTCCGCGAG
ATCCGCTCGC CGGACGGCGA ACTCCTGATC GACGCGCGCG AGCTCGAATA CGACGTGCTG
ATCCTCGCGC TCGGCAGCCA GGCCAATGAT TTCGGCGTGC CGGGTGTGCG CGAGCACTGC
TACTTCATCG ACAGCCAGCA GCAGGCCGAA ACCTTCAACG AAGCGCTGCG GATGCGCGTG
TTCCGCAGCA TCGCGCGCGA CGAGCCGTTT CGCGTCGCGA TCGTCGGTGC GGGCGCGACG
GGCGTGGAGC TGGCAGCGGA GCTAAGCCGG CTGCTGGAAA TCGCGCAGGC GTATGGTGAT
GAGACGGTGC GCGAGCGGCT GCAGCTGACG CTGCTCGAAA GCGGCCCGCG CATCCTCGCC
GCGTTTCCGC CGAGGATTTC CGCGTCCGCG CAGCGCCGGC TCGAACAGAT CGGCATTCAC
GTGCTGACGT CGACGCGCGT CACGGCGGCC GATGCGAACG GCTTCCACTA TGGAGACGGT
TCGTTTGCCG AGGCGGATTT GATGGTGTGG GCGGCCGGCG TGAAGGCGTC CGATTTCATG
CAGGCGCTGG GCGGGCTCGA TACGAACCGT GCGAACCAGA TCATGGTCGG GCCCACGTTG
CAGGCCACGG CCGACGAACA CGTGTTCGCG ATCGGCGATT GCGCGAGCCT GCAACCCGAC
GGCCAGCAGC GGCCGCTGCC GCCGACCGCG CAGGTGGCGA CCCAGCAGGC CGAGCATCTC
GCGAAGCACC TGCCCGCGTG GCTCGACGGC AAACCGTTGC CGCCGTTCGC GTTCCACGAT
TTCGGCGCGC TCGTGTCGAT CAGCGACTAC GACGCATTCG GCACGCTCGG GCAATTCGGG
TTCTTCCGCG GCGGCTTCAT CCAGGGGCGT TTCGCCCAGT TCAGCCATCT GATGCTGTAC
CGGCGGCACC AGCAGGCGCT GCACGGATTC TCCAAGGCGA CGCTGCTGTG GATCGCCGAA
CGGATCAACG GCTGCGTGCA GCCGCGCATC CGCCTGTCTT GA
|
|---|
| Protein sequence | MTTLTRPARI VIVGGGIAGL QLATRLGERL GRSGRAQVTV VDRSPTHVWK PMLHTIAAGT
RDLQQQQVIF LAHARDHGYT YQPGELKGLD RARRRVQLRE IRSPDGELLI DARELEYDVL
ILALGSQAND FGVPGVREHC YFIDSQQQAE TFNEALRMRV FRSIARDEPF RVAIVGAGAT
GVELAAELSR LLEIAQAYGD ETVRERLQLT LLESGPRILA AFPPRISASA QRRLEQIGIH
VLTSTRVTAA DANGFHYGDG SFAEADLMVW AAGVKASDFM QALGGLDTNR ANQIMVGPTL
QATADEHVFA IGDCASLQPD GQQRPLPPTA QVATQQAEHL AKHLPAWLDG KPLPPFAFHD
FGALVSISDY DAFGTLGQFG FFRGGFIQGR FAQFSHLMLY RRHQQALHGF SKATLLWIAE
RINGCVQPRI RLS
|
|---|
| |