Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_4597 |
Symbol | |
ID | 6180455 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | - |
Start bp | 1701741 |
End bp | 1702394 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641684357 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001811268 |
Protein GI | 172063617 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.00568004 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGGCTGAAG TCACTGAGTG CGCGCCGTCG AAGCGGCGCA CGCGCGGGCG GCCGCTGGCG GACGCGTCCG TCGGTCCGGA CGTGATATTG CGAGCCGCGC GCCGCACGTT CGCGAAGCGC GGCTACGATG CGACGAGCGT GCGTGAGGTC GCGCGCGAGC TGGGCATCGA CGCGGCGCTG ATCGCCCATC ATTTCGGCAC GAAGGAAACG CTGTGGCTGG CGGTCGTCGA GCAGATCGCC GAGCTGGCCG AGCCGATGTT CGATGCGTTG CGCGCGCTGC GCACGTCGTC ATTGCCGCAT CGCGAGCGCA TGCGGCGCGC GATCGAGCTG TGTGTCGATC ACGAATTCGA CGAGCCGGAC ATCGGCATGT TCTTCTCGAC CGCTGCGACC GAGGAGGGCG CGCGGCTCGA CCGGCTGCGG GAGCGGCTCG TGCGACCGTA TCACGACGCG ATGTTTCCGC TGCTGGCGGA GGCCGTCGAC GCTGGCGCGA TCCGCCCGGT CGATCCCGAT GTGCTGTTCT TCATGATCGC GAGCGCGATC GGCACGACGG TGTCGTATAG CCATCTGATT CTCGAGTTCA CGTCGTTGCC CACGCGGCAG GATGCGTTCC GGCAGGCCGT GCTCGACGTC GCGCTCAACT TCCTGCTCGA CTGA
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Protein sequence | MAEVTECAPS KRRTRGRPLA DASVGPDVIL RAARRTFAKR GYDATSVREV ARELGIDAAL IAHHFGTKET LWLAVVEQIA ELAEPMFDAL RALRTSSLPH RERMRRAIEL CVDHEFDEPD IGMFFSTAAT EEGARLDRLR ERLVRPYHDA MFPLLAEAVD AGAIRPVDPD VLFFMIASAI GTTVSYSHLI LEFTSLPTRQ DAFRQAVLDV ALNFLLD
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