| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4595 |
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| Symbol | |
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| ID | 6180453 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 1699918 |
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| End bp | 1700679 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641684355 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001811266 |
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| Protein GI | 172063615 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.00664453 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACAGGCA GCGAACGGCA ACGTACCGCG ATCGTCACAG GCGGATCGAG CGGAATCGGC
TTCGCGATCG CGAGCCGGCT GGTGGAGGAC GGGTATCGCG TCGCGATCGT CGGGCGCGAT
GCGGGGCGGC TGGAAGCGGC CGTCGCGCGG CTCGGCAACG CGGCGATCGG GCAGGCGGCC
GATCTGAGCG TGCGGCGCGA CGCGGCGTCG GCGGTCGCGG CGATCGTCGC GCGGTGGCCG
CGCATCGACG TGCTGGTCAA CAACGCGGGG CTGACGGGGC GGGTGGGCGC GGACACCGAG
GCGGGCGACG CCGAAACCGT ATGGGATGCC GTCCTCGCTG CGAACCTCAA AAGCACGTTC
ATCACGACGC TGGCCGTGCT GCCGCACCTG GCCGCGCGCG CGGCGCGGAT CGTGAACATC
GGGTCGATCG CGGCGCGCGC CGGCAGCCTC CTGCCGGGCG GCCTCGCGTA TGCGGCGGCG
AAGGCGGGCG TCGAAGGGTT CACCGGCGCG CTGGCGCGCG AGCTCGGGCC GCGCGGCGTC
ACGGTCAATA CGGTCGCGCC CGGCTATATC GCCGATACGC GTTTGTTCGG CGATGCCGGC
GTCGCACCGG CCATCGCGAT GACGATCCGC GAGCAGACGC CGGTCGGCCG CGCCGGCCAT
CCGGACGACA TCGCGGACGC GGTCGCGTGG CTCGCCGGGC CGCGCGCGGC ATTCGTCACC
GGCGCGACGA TCGCGGTGAA CGGCGGCTGG CGGGTCGGGT GA
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| Protein sequence | MTGSERQRTA IVTGGSSGIG FAIASRLVED GYRVAIVGRD AGRLEAAVAR LGNAAIGQAA
DLSVRRDAAS AVAAIVARWP RIDVLVNNAG LTGRVGADTE AGDAETVWDA VLAANLKSTF
ITTLAVLPHL AARAARIVNI GSIAARAGSL LPGGLAYAAA KAGVEGFTGA LARELGPRGV
TVNTVAPGYI ADTRLFGDAG VAPAIAMTIR EQTPVGRAGH PDDIADAVAW LAGPRAAFVT
GATIAVNGGW RVG
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