| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4593 |
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| Symbol | |
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| ID | 6181495 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 1698329 |
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| End bp | 1699084 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641684353 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001811264 |
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| Protein GI | 172063613 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.00700945 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAACGAC TCGAAGGCAA AGTGGCGTTG ATCACGGGCG GCGCCCGCGG CCAGGGCGAG
GCGGAGGCGC GCCGGTTCGT CGCCGAAGGT GCACGCGTGG TGATCGCCGA CGTGCTGGAC
GACGCCGGCC GCCGCGTCGC GGCCGAACTT GGCGACGCCG CGCGCTACCA GCATCTCGAC
GTGACGAACG AAGACGATTG GCACACTGCC GTGCTTGCAA CGCTCGCGCA TTTCGGGCGG
CTCGACATCC TCGTGAACAA CGCGGCGATC CTGAAGCTCG TGCCGATCGA GTCCTGTTCG
CTCGACGACT ATCGCAAGGT GATCGACGTG AACCAGGTCG GCTGCTGGCT CGGCATGAAA
TCGGCGCTGG CCGCGCTGAA GGATGCGGGC GGCGGCTCGA TCGCCAACGT GTCGTCGACG
GCCGGGATGG AAGGCGTGGC CGGCGGCAGC GCGTATGTGT CGAGCAAGTT CGCGGTGCGC
GGGATGACGA AGGCCGCCGC GCTCGAGTTC GGCCGCTACG GAATCCGCGT GAATTCGGTC
CACCCAGGCG GCATCGACGC CGTGATGGCG CGCCCGCCGG AATACGCGGA CTTCGACCCG
TCGTCGATCT ATAGCGGGCT GCCGATCGCA CGCATCGGCA AACCCGACGA AGTCGCGAGC
CTCGTGCTGT TCCTCGCATC CGACGAATCC GCGTACTGCA CGGGCTCGGA ATTCATCGTC
GACGGCGGGA TGCTCGCGGG CAGTACGTTC CACTGA
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| Protein sequence | MKRLEGKVAL ITGGARGQGE AEARRFVAEG ARVVIADVLD DAGRRVAAEL GDAARYQHLD
VTNEDDWHTA VLATLAHFGR LDILVNNAAI LKLVPIESCS LDDYRKVIDV NQVGCWLGMK
SALAALKDAG GGSIANVSST AGMEGVAGGS AYVSSKFAVR GMTKAAALEF GRYGIRVNSV
HPGGIDAVMA RPPEYADFDP SSIYSGLPIA RIGKPDEVAS LVLFLASDES AYCTGSEFIV
DGGMLAGSTF H
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