Gene BamMC406_4587 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_4587 
Symbol 
ID6181123 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010552 
Strand
Start bp1693502 
End bp1693963 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content60% 
IMG OID641684347 
Productsignal-transduction protein 
Protein accessionYP_001811258 
Protein GI172063607 
COG category[T] Signal transduction mechanisms 
COG ID[COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.00378118 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.00177049 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCACGA CTGTCGCGCA AATTCTCAAG GCCAAGCCGG ATTCGGGCCG CACGATCTAC 
ACCGTCACGA AAAACGATTT CGTCTACGAC GCCATCAAGC TGATGGCCGA AAAGGGAATC
GGCGCGCTAC TGGTCGTCGA CGGTGACGAC ATCGCCGGCA TCGTTACCGA GCGCGACTAC
GCGCGCAAGG TCGTGCTGCA GGAGCGTTCG TCGAAAGCCA CCCGCGTCGA GGAAATCATG
ACGGCCAAGG TGCGCTACGT CGAACCATCG CAATCCACCG ACGAGTGCAT GGCGCTGATG
ACCGAACACC GGATGCGCCA TCTGCCCGTC CTCGACGGCG GCAAGCTGAT CGGCCTGATC
TCGATCGGCG ACCTGGTGAA GAGCGTGATT GCCGACCAGC AATTCACGAT CAGCCAGCTG
GAACACTATA TCCATGGCAC TCCGTCGGTC ACGTCCGTCT GA
 
Protein sequence
MSTTVAQILK AKPDSGRTIY TVTKNDFVYD AIKLMAEKGI GALLVVDGDD IAGIVTERDY 
ARKVVLQERS SKATRVEEIM TAKVRYVEPS QSTDECMALM TEHRMRHLPV LDGGKLIGLI
SIGDLVKSVI ADQQFTISQL EHYIHGTPSV TSV