| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4586 |
|---|
| Symbol | |
|---|
| ID | 6179386 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010552 |
|---|
| Strand | - |
|---|
| Start bp | 1692674 |
|---|
| End bp | 1693324 |
|---|
| Gene Length | 651 bp |
|---|
| Protein Length | 216 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641684346 |
|---|
| Product | GTP cyclohydrolase II |
|---|
| Protein accession | YP_001811257 |
|---|
| Protein GI | 172063606 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0807] GTP cyclohydrolase II |
|---|
| TIGRFAM ID | [TIGR00505] GTP cyclohydrolase II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.00025372 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.00088972 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGATGTCTT CGCGTCCCCA ATCGCCCACG CCGGGCAATG GCCAGGCCGA CGAGTGCGTG
ACGCTCGTCG CCACCGCGTC GCTGCCCACG CGCTACGGTA CGTTCACGTC GTACGCTTTC
CGCGTATCGG GCAGCGATGC CGAACATCTC GCGCTCGTGA TGGGTGACGT CACCGGCGAG
CAGTCCGTGC TTGCGCGGCT GCATTCCGAG TGCCTGACGG GCGACGTGTT CGGCTCCTAC
CGCTGCGATT GCGGCGAGCA GCTCGATCTC GCGCTGCGCT ACATCGCGGC GGAAGACCGC
GGCGTGCTGC TGTATCTGCG TGGCCACGAA GGGCGGGGCA TCGGCCTGAG CAACAAGATC
CGCGCATATG CGCTGCAGGA GCAGGGGCGC GATACCGTCG AGGCCAATCT CGACCTCGGC
CTGCCCGACG ACGCCCGCGA ATACGACTCG GCCGCCGCTA TCCTGCGGAT CCTCGGCGTG
ACGTCGGTGC GCCTGATGAG CAACAACCCG AAGAAGTTCG ACACGCTCGT GAAGCATGGC
ATTCCGGTCT GCGAACGCGT GGCGCTTGCG GTGCCGATGC GTGAGGAAAA CGAGCGCTAT
ATCCGGACCA AGCAGGTGAA GTTCGGGCAT TACTTCGAAG AAAACGAGTA A
|
|---|
| Protein sequence | MMSSRPQSPT PGNGQADECV TLVATASLPT RYGTFTSYAF RVSGSDAEHL ALVMGDVTGE
QSVLARLHSE CLTGDVFGSY RCDCGEQLDL ALRYIAAEDR GVLLYLRGHE GRGIGLSNKI
RAYALQEQGR DTVEANLDLG LPDDAREYDS AAAILRILGV TSVRLMSNNP KKFDTLVKHG
IPVCERVALA VPMREENERY IRTKQVKFGH YFEENE
|
|---|
| |