| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4579 |
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| Symbol | |
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| ID | 6180716 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 1685856 |
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| End bp | 1687403 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641684340 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_001811251 |
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| Protein GI | 172063600 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0188996 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.000000771093 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCGCGTCC CTGAACCGCC GGCCGCGTCG ATCGCCGCCG CCGCGCTCGC GACTGCCGTC
GCGCTGGCCG GTTGCGCAAC GTCGTCGATC GATCTGGCGC CGGACGCACC CGATCGCCCG
TGGCAGCCGC AAACGTCGGC CGCGGGCGAC ATCGTGGCGG CCCCGCCGCT CGCGTCCGCG
CAACGCGCAC CGCACGACTA CACGCTGCCG GCATCGCCCG TGCTCGCATC GGTGTCGCCG
CCCGCCGCGC TCGATACCGC GCATCCGTAC ACGCTGCCCG AGCTGATCGA TCTCGCCGAA
TCGACGAATC CGCTGACCCG CATCGCGTGG AACGACGCGC GCAACGCGGC GCTCGCCGTC
GGCATCGCGA AGGCCGCGTA CCTGCCGAAT TTGTCCGCGA CCGCGATGGG CGCGTACCAG
ACGAGCCACG GCTCGACATC CACGATCCTC GGCGACGCGT CGAGCAATAC GACCGTGCAC
GGCACGATCT CGGCGCTGTC GCTGCAATGG CTGCTGTTCG ATTTCGGCGG CCGCGCGGCG
CGCGTCGAGG CGGCCGAGCA GGTGTCGGTC GCGTCGAACG TCGCATTCAC GGCCGTGCAT
CAGCAGGTGA TCCACGACGT GACGGTCGCG TACTACCGCT ACGAAGCCGC CCGCTCGCGC
GCGGCCAGCG CGCAGCAGGG CCTGACGAAC GCCGACGCGA TCCTCGCGGC GTCCCGCGCA
CGGCTCAAGC AAGGCGTCGG CACCGTCGTC GAACTCGCCC AGTCGACCCA GAACCGCGCG
CAGGCGAATC TCGCGCTGGT GCAGGCGAAC GGCGCGCAAA GCGACAGCTA TCTCGCACTG
GTTTCCGCGC TCGGCATCTC GCCGCTGTCG AAGCCGCCGA TCGCCGCGCT GCCGAAGCGG
CCGCTGCCGC CCGCGCTCGC TTCGTCGGTC GATGCGATCG TGTCGGATGC GATCGCGCGC
CGTCCCGACC TGCAGGGCGC ATATGCGCTC GAGCAGGCCA ACCGCGCGAA GATCAAGGCC
GCGGAAGCCG CGTTCATGCC GAAGGTCTTC CTGTCCGCGT CGACATCCTA TGCCAGCGGC
GGCACGGCGA TCACCGCGCT GCCCGCGATC GGCGACCAGG CGCCGACCGT CAACCTGAAC
GGCAGCCGCT ATGGCGGCGG CGTGTTCCTC GGCGTGACGA TCCCGCTATA CGATGGCGGC
CTGCGCTCGG CGGTGCTGAT GCAGGCACGC AACGATGCGC AGAGCGCGTC CGCGCGCCTC
ACGCGGACCA AGGAGGAAGC CGTCCGCCAG GTCGTCGCCG CGCAGAATGC GGTGCAGACG
AGCCTCGCGT CCCACGATGC GGCAAAGGCG CTCGTCGATG CCGCGCAGAC GAGCTACGAC
GCGGCGCTGA CCGCGTACCG GAACGGCGTG GGCTCGGTCA CCGATGCGAC GATCGCGCAG
AGCCAGTTGC TCGCGGCCCG CAACGCGGAG GTCGACAGCT ACGCCGGCGC GCTGTCGGCC
GCCGCCGCGC TCGCGCTCGC GACGGGGACG ATCGGGTCGT CGCAGTAA
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| Protein sequence | MRVPEPPAAS IAAAALATAV ALAGCATSSI DLAPDAPDRP WQPQTSAAGD IVAAPPLASA
QRAPHDYTLP ASPVLASVSP PAALDTAHPY TLPELIDLAE STNPLTRIAW NDARNAALAV
GIAKAAYLPN LSATAMGAYQ TSHGSTSTIL GDASSNTTVH GTISALSLQW LLFDFGGRAA
RVEAAEQVSV ASNVAFTAVH QQVIHDVTVA YYRYEAARSR AASAQQGLTN ADAILAASRA
RLKQGVGTVV ELAQSTQNRA QANLALVQAN GAQSDSYLAL VSALGISPLS KPPIAALPKR
PLPPALASSV DAIVSDAIAR RPDLQGAYAL EQANRAKIKA AEAAFMPKVF LSASTSYASG
GTAITALPAI GDQAPTVNLN GSRYGGGVFL GVTIPLYDGG LRSAVLMQAR NDAQSASARL
TRTKEEAVRQ VVAAQNAVQT SLASHDAAKA LVDAAQTSYD AALTAYRNGV GSVTDATIAQ
SQLLAARNAE VDSYAGALSA AAALALATGT IGSSQ
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