| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4571 |
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| Symbol | |
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| ID | 6180746 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 1677006 |
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| End bp | 1678085 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641684332 |
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| Product | porin |
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| Protein accession | YP_001811243 |
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| Protein GI | 172063592 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.442786 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0000361687 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGTCAAGC AAGCGGTAGC AGCAGCAGTC ATCGGAATGA GCGCCGTGTC CGGCGCGTGG
GCGCAGAGCA GCGTGGTGCT GTACGGCAGC ATGGACGCGG GCGTCGCGTA CGTGAACAAC
GTCGGCGGCC ACGCGAAGTG GGCAATGATC CAGGGCAACA CGCAGCCCGA CCGGTGGGGC
CTGAAAGGCA AGGAAGACCT CGGCGGCGGC CTGTCGGCGA TCTTCCAGCT GGAAAACGGC
TTCTATACGA ACAACGGCCA GTTCGCGACC GCGAACACGA TCTGGAACCG CGCGGCGTTC
GTCGGGCTCA GTTCGGACCG CTACGGCACG CTGACGCTCG GCCGCCAGAC GCCGCTGACG
TTCGATTATC TCGATCCGCT CAGTACCGCG TATCTCGCGA TGAGCTGGTA TGCGTTCCAT
CCCGGCAACA TCGACGGGCT CGCCGCGACC GGCAACGTGC CGTACAACAA CGCGGTCAAG
TACCGTTCGC CGAGCTTCGG CGGCTTCTCG GCCGCGGCGA CGATGGCCCT CGGCAACACG
ACGAACTTCT CGACCGGCAA GTCGGTCGGC GTCGCGCTGA ACTATGCGAA CGGGCCGTTC
AAGGCGTCGG CCGTCTACTC GAACGAGCAC GACCGCGCGA TCCTGATCAG CCAGACGGGG
ATCACGTCGT TCCAGGGGCA AAATACCGCG AACGGCTATC TGGCGAACAA GGTCGAGAAC
ATCGGCGCGG GTGCGTCGTA CCAGATCGGC GACTTCCTCG TGCACGGCCT CTACACGCGC
GTGAAGATGC AGTCGAACGG GTTTTCCGAC ACGTTCCAGA GCTACGACGC GGGCGTGAAC
TATCGCAGCA GCGCGTTCAA CACGATCGCG GGCGGCGCGG CGACCACGAC GCTGGCCGGC
CGACGCTGGA CGCAGGTCGA GCTCGGCGAC ATCTATTCGC TGTCCAAGCG CACGCAGCTC
TATGCGAACG TGCTGTTCGA GCACGGCTCG GGCGGTGCGA AGGCCGCGTT CTTCACGGCC
GGCACGTCAA GCACCGCGAA CCAGGTGATC GTGCTGACCG GCATTCATCA CTCGTTCTGA
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| Protein sequence | MVKQAVAAAV IGMSAVSGAW AQSSVVLYGS MDAGVAYVNN VGGHAKWAMI QGNTQPDRWG
LKGKEDLGGG LSAIFQLENG FYTNNGQFAT ANTIWNRAAF VGLSSDRYGT LTLGRQTPLT
FDYLDPLSTA YLAMSWYAFH PGNIDGLAAT GNVPYNNAVK YRSPSFGGFS AAATMALGNT
TNFSTGKSVG VALNYANGPF KASAVYSNEH DRAILISQTG ITSFQGQNTA NGYLANKVEN
IGAGASYQIG DFLVHGLYTR VKMQSNGFSD TFQSYDAGVN YRSSAFNTIA GGAATTTLAG
RRWTQVELGD IYSLSKRTQL YANVLFEHGS GGAKAAFFTA GTSSTANQVI VLTGIHHSF
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