| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4563 |
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| Symbol | |
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| ID | 6179266 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 1670891 |
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| End bp | 1671688 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641684324 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001811235 |
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| Protein GI | 172063584 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00447639 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.00143466 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATTGAGA TCGATCTGAC CGGGCAGATG GCGGTGGTGA CGGGCGGTTC GTCCGGCATC
GGCCTCGCGA CTGCCGAACG GTTCCTGCAG GCCGGCGCGT CGGTCGCGAT TTGCGGCCGC
GACGGCGAAC GCCTCGCGCG CGCCGAAGCG ATGCTCGGCG GGAAATACCC GGGCGCGCAA
TTGCTCGCCG TGCGTTGCAA CGTGCTCGAC GAAGCCGACG TGGCCGCGTT CGCGCAGGCC
GTGTCCGAGC GCTTCGGCCG CGCCGACATG CTGGTCAACA ACGCGGGCCA GGGGCGCGTG
TCGACCTTCG CCGACACGAC CGACGACGCG TGGCGCGAAG AGCTCGAACT GAAGTACTTC
AGCATCATCC GCCCGACGCG CGCGTTCCTG CCGCTGCTGC GCGACGCGCA GGCGCCGACG
ATCACCTGCG TGAACTCGCT GCTCGCGCTG CAGCCGGAGC CGCACATGGT CGCGACGTCC
TCGGCGCGTG CGGGCGTGCT GAGCCTCGTG AAGTCGCTCG CGACCGAGCT GGCGCCGCAG
CGCATCCGCG TGAACTCGAT CCTGATCGGC ATCGTCGAGT CGGGCCAGTG GCGCCGCCGC
TACGAAGCGC AGGCACACGC CGGCGAAAGC TGGGAAGACT GGACGGGCGC GCTCGCCCGC
AACAAGAACA TTCCGCTGAA CCGCTTCGGC AAGCCCGACG AGGCAGCCTG GGCACTTTTT
TATCTCGCAA CGCATCTGTC GTCGTACACG ACGGGCAGCC ATATCGACGT TTCTGGAGGC
TTTGCACGCC ATGTCTAA
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| Protein sequence | MIEIDLTGQM AVVTGGSSGI GLATAERFLQ AGASVAICGR DGERLARAEA MLGGKYPGAQ
LLAVRCNVLD EADVAAFAQA VSERFGRADM LVNNAGQGRV STFADTTDDA WREELELKYF
SIIRPTRAFL PLLRDAQAPT ITCVNSLLAL QPEPHMVATS SARAGVLSLV KSLATELAPQ
RIRVNSILIG IVESGQWRRR YEAQAHAGES WEDWTGALAR NKNIPLNRFG KPDEAAWALF
YLATHLSSYT TGSHIDVSGG FARHV
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