| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4557 |
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| Symbol | |
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| ID | 6181396 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 1663172 |
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| End bp | 1664572 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641684318 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001811229 |
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| Protein GI | 172063578 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.00783301 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCACTT TCGACAACGT CGTGGCCGGC AGGGCCACGA TGGAAGCTGC CGCCTCCACG
CCCGGCGCGA TCATCGCGCG GCTCGAGCGG CTTCCGGCCA ACGCGATGCA GATCCGCGCG
CGCGTGCTGA TCGGCACCGC GACGTTCTTC GACGGCTTCG ACGTGATCAC GATCGCGGCG
ACGCTGCCGC TGCTGATTCA CAAGTGGGGG CTGTCGCCGA CGCAGATCGG CATGCTGATC
GCGTCCGGCG CGATCGGCCA GCTGATCGGC GCGTTCCTGT TTCCCGCGCT CGCGGAGAAG
CATGGCCGCG TGAAGGCCAT CGCGTGGAGT TCCGCCGTGA TCGGCGTCAC CAGCATCGCG
TGCGGCTTCG CGCCGACGTT CGAGATCTTC GTGCTGCTGC GGATCCTGCA GGGGCTCGGG
CTGGGCGGCG AGCTGCCGGT CGCCGCGACC TACATCAACG AGATCACGCG TGCGCACGGC
CGCGGCCGCT TCGTGCTGCT GTACGAGATC GTGTTTCCGA TCGGCCTGCT GGTGTCGATG
GCGCTCGGCG CGTGGCTCGT GCCGCGGTTC GGCTGGGAAA TCATGTACTT CGTCGGCGGG
CTGCCGCTGA TCCTCGCGCT GGTGCTCACG CGCCTCGTGC CGGAATCGCC GCGCTGGCTC
GCATCGCGCG GGCGCCTCGC GGAAGCGGGG CGTGCGGTCG GCGTGTTCGA AGCGTCGGTG
CGCGGCGAGC TGCCGCCGGC GACGCAGGCG GCCGCGTTCG ACGAGATGGT GCGCCAGCAC
CCGAAGCGCC GGATGAGCGA CCTGTTCAGC GCCGCGTATC GCAAGCGCAC GCTCGCGGTG
GCGACGCTGT GGGCGACCTG CGGGTTCATC CAGTACGGAT TGTCGACGTG GCTGCCGACG
ATCTACAAGA ACTTCTATCA TGCGCCGCTG CAGCTCGCGC TGAATCTCGC GGTGATTGGC
TCGGTGATGG GCGTGCTCGG TTCGCTCGCG TCGGCGCTGC TCGTCGACAA GCTCGGCCGC
AAGCCGGTGA TCGTCTGGTC GTTCGTGCTG TGCGCGCTGT CGCTGGCGCT GGCGGGTGTC
TACCACGCGT CGTCGGTGTA TGTCGTCGCG ACCTTCTGCT CGTTGTCGCT GGGGCTGATG
GCATCGGGCT TCATCACGGC CTACGTCTAT ACGCCGGAGC AGTATCCGAC GAGCATCCGC
GCGTCCGGCT GCGGGCTCGG CAGCGCATGG CTGAAGATCG CATCGTTCGC GGCGCCGATG
ATCGTGCCGC ACGCGATCAT CGGCGGCAAC CTCGCGCCGG CGTTCTACCT GATCGGCATC
GTGCCTCTGA TTGCGGCGCT GACCGTCCAC TTCGTCGGGA TCGAGACGAA GGGCAAGGTG
CTGGAGGCAC TGGAGGCATA A
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| Protein sequence | MSTFDNVVAG RATMEAAAST PGAIIARLER LPANAMQIRA RVLIGTATFF DGFDVITIAA
TLPLLIHKWG LSPTQIGMLI ASGAIGQLIG AFLFPALAEK HGRVKAIAWS SAVIGVTSIA
CGFAPTFEIF VLLRILQGLG LGGELPVAAT YINEITRAHG RGRFVLLYEI VFPIGLLVSM
ALGAWLVPRF GWEIMYFVGG LPLILALVLT RLVPESPRWL ASRGRLAEAG RAVGVFEASV
RGELPPATQA AAFDEMVRQH PKRRMSDLFS AAYRKRTLAV ATLWATCGFI QYGLSTWLPT
IYKNFYHAPL QLALNLAVIG SVMGVLGSLA SALLVDKLGR KPVIVWSFVL CALSLALAGV
YHASSVYVVA TFCSLSLGLM ASGFITAYVY TPEQYPTSIR ASGCGLGSAW LKIASFAAPM
IVPHAIIGGN LAPAFYLIGI VPLIAALTVH FVGIETKGKV LEALEA
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