| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4542 |
|---|
| Symbol | |
|---|
| ID | 6181476 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010552 |
|---|
| Strand | - |
|---|
| Start bp | 1649469 |
|---|
| End bp | 1650347 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641684303 |
|---|
| Product | methyltransferase |
|---|
| Protein accession | YP_001811214 |
|---|
| Protein GI | 172063563 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3315] O-Methyltransferase involved in polyketide biosynthesis |
|---|
| TIGRFAM ID | [TIGR00027] methyltransferase, putative, TIGR00027 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.252501 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.165839 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGGCC TCCATCAGGA CCATCAAGAC CATCAGGACG CCCCCGACAG CACCGCCGCC
CGCGTCGCGC TGTGGCGCGC GCTGCACGTC GAACTCGATG CGCCGCCGCA CGTGCTCGCC
GATGAAGTCG GCCTGCGCCT GCTTGCACCG GCGCCCGGCT GGCAGCAGCG CGGCGACATG
GATCCCCAAT TCACCCGGCC GTTTCGCGCC TCGATCGTCG CGCGGGCGCG CTTCATCGAG
GATCTCGTCG TCGAGCAGGC CGCGCAGGGC GTGAGCCAGT ACGTGATCCT CGGCGCGGGG
CTCGACAGCT TCGTGCAGCG CCGGCCGGAG ATGGCATCGC GCCTGACCGT CTTCGAAGTC
GATCCGCCCG CGCCGCAGGC GTGGAAGCGG CGTCGCCTGA CCGAGCTCGG TTTCGGCGTG
CCGGACTGGC TGCGGTTCGT GCCGGTCGAT TTCGAGGCAA AGCAGTCGTG GCGCGACGCG
CTCGTTGGCG CGGGCTTCGA TGCGGGCAAA CCGGCGGTCG TGGTGTCCAC CGGCGTCAGC
ATGTACCTGA CGCGCGACGC GAACGCGGCG TCGCTGCGCG AAGTCGCGTC GCTCGCGCCG
GGTTCGACGT TCGCGATGAC TTTCCTGCTG CCGCTCGAGC ATGCGGATCC GGACGTGCGT
CCGGCGCTCG AAATGGCCGC GAAGGGCGCG GCCGCCAGCG GCACGCCGTT CATCAGCTTC
TTCATGCCGA CGGAGATCCG AACGCTCGCG ACGGACGCCG GCTTCGCGCG GGCCGAGCAT
GTGTCGGCCG CGGAGCTTAC GCGCCGCTAC TTCGCCGATC GTACCGACGG CCTGCGTCCG
CCGAACAACG CGGAAGAGCT GCTGGTCGCG ACGGTGTAA
|
|---|
| Protein sequence | MTGLHQDHQD HQDAPDSTAA RVALWRALHV ELDAPPHVLA DEVGLRLLAP APGWQQRGDM
DPQFTRPFRA SIVARARFIE DLVVEQAAQG VSQYVILGAG LDSFVQRRPE MASRLTVFEV
DPPAPQAWKR RRLTELGFGV PDWLRFVPVD FEAKQSWRDA LVGAGFDAGK PAVVVSTGVS
MYLTRDANAA SLREVASLAP GSTFAMTFLL PLEHADPDVR PALEMAAKGA AASGTPFISF
FMPTEIRTLA TDAGFARAEH VSAAELTRRY FADRTDGLRP PNNAEELLVA TV
|
|---|
| |