| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4541 |
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| Symbol | |
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| ID | 6179668 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 1644612 |
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| End bp | 1649453 |
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| Gene Length | 4842 bp |
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| Protein Length | 1613 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641684302 |
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| Product | NAD-glutamate dehydrogenase |
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| Protein accession | YP_001811213 |
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| Protein GI | 172063562 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2902] NAD-specific glutamate dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.307846 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGCGA AGAACGAGGA AGTCGTCGCA CACCTGCTCT CGGATGTCGT CGAATTCGCG
CGCGGGCGCC TGCCCGAAGC CACGTTCCGG ATCGTCGAAC CGTTCCTGCG TCATTACTAC
GACTTCGTCG ACGCCGACGA TCTGCAGGAT CGCAGCATCG CCGACCTGTA CGGCGCCGCG
ATGGCGCACT GGCAGACCGC CCAGAAGTTC GTGCCCGGCA GCGAGCGGCT GCGCGTGTAC
AACCCGATCC TCGAGCAGCA CGGCTGGCAC TCGGACCACA CGGTGATCGA GATCGTCAAC
GACGACATGC CGTTCCTCGT CGACTCGGTG ACGATGGCGG TGAACCGCCT CGGGCTCGCG
CTGCACTCCG CGCTGCACCC GGTGTTCCGC ATCTGGCGCG GCGGCAACGG CGGGATCGAG
CGCGTCGACG CCGGCGGCGC GACGGCCCCC GACGGCCAGT CGCAGCTCGC GTCGTTCATC
CATTTCGAAG TCGACCGCTG CGGCGACGCC GCGCTGCTCG ACACGCTGCG CGACGACATC
GCGCGCGTGC TCGGCGACGT GCGCGCGTCG GTCGAGGACT GGCCGAAGAT CGTCGACATC
GCGCGCGCGA CGATCAAGGA CATGAAAGCC CGCGAATCCA CCGCGGAAGA CATCGAGGCG
CGCGCGTTCC TCGAATGGAT GGCCGCCGAC CACTTCACGT TCCTCGGCCA GCGCGACTAC
TCGCTGGTAT CGGATGCGTC GGGCTTCGGG CTGCGCGGCG TCGAGGGCTC CGGCTTCGGC
CTGCTGCGCG AATCGCTGCG GCCGTCCGGC GCGCCGGACG TGACGCCGCT GCCGCCGGCC
GCCGCCGAGA TCATCACCGG CCCCTGGCCG ATCTTCCTGA CGAAGGCGAA CTCGCGCGCG
ACCGTGCACC GGCCCGGCTA CCTCGACTAC GTCGGCGTGA AACTGGTCGG CGCCGACGGC
AAGGTGACCG GCGAGCGCCG CTTCATCGGG CTCTACACGT CGACCGCGTA CATGGTGTCG
AGCGCCGAGA TTCCGATCGT GCGCCGCAAG TGCGCGAACA TCGTGCGGCG CGCGGGCTTC
CTGCCGAAGG GCCATCTCGG CAAGTCGCTG GTGACGGTGC TCGAAACCTA TCCGCGCGAC
GAACTGTTCC AGGCCGACGA AGATCAGCTC TACGACATCG CGCTCGGCAT CCTGCGCCTG
CAGGAACACC AGCGCACGCG CCTGTTCGTG CGGCGCGACC GCTTCGACCG CTTCGTGTCG
TGCCTCGCGT TCGTGCCGCG CGACAAGTAC AACACCGACC TGCGCCGCCG CATCGCGAAG
CTGCTCGTCG ACGCATACAA CGGCGTGAAC GTCGAATTCA CGCCGCTGCT GTCGGAATCG
GCGATCGCGC GGATTCATTT CGTCGTCCAT GCCGAACCGG GCACGATGCC CGACGTCGAC
ACGCGCGAGC TCGAAGCGCG GCTCGTGCAG GTCGCGCGCC GCTGGCAGGA CGATCTCGCG
GACGCACTGC TCGACGCGTT CGGCGAGGAG CAAGGCAACC GGCTGCTGCA GCGCTATGCG
GAATCGTTCC CGGCCGGCTA TCGCGACGAC TATCCGGCGC GCACGGCCGT GCGCGACATC
GAGCTGATCG AGCGCGTGAA GGAGTCGGGC CAGCTCGCGA TGAACCTGTA CCGCCCGATC
GAGGCCGGGC CGCGCGCGTT CCGCTTCAAG GTGTATCGCG CGGGCGACCC GATCGCGCTG
TCGCGCAGCC TGCCGATGCT GGAACATCTG GGCGTGCGCG TCGACGAGGA GCGGCCGTAC
CGGATCCAGA CGCAGGATGC CGCGCCCGCG TGGGTGCACG ACTTCGGCCT TGAACTCGCC
GACGACACCG AGTTCGACAT CGAGCGCGTG AAGGGCCTGT TCGAGGATGC GTTCGACCGG
ATCTGGAGCG GCCGGATCGA GAACGACGAC TTCAACCGCC TGGTGTTGCG CGCCCACCTG
AGCGCCCGCG AGGTCACGAT CCTGCGTGCG TATGCGAAAT ACCTGCGGCA GGTCGGCTCG
ACGTTCAGCG ACGCGTACAT CGAGCGCGCG CTGACCGGCA ACCCGGCGAT CGCACGGCAG
CTCGTCGAGC TGTTCCTGCT GCGTTTCGAC CCGGCCATCG GCGGCACGCG CGACGTGCAG
GCCGAACACC TGCTGAAGGC CATCGAGACG GCGCTCGACC AGGTGCCGAA CCTCGACGAG
GATCGGATCC TGCGCCAGTT CCTCGGCGTG ATCAACGCGA CCGAGCGCAC CAACTATTTC
CTGCACGACG CGAACGGCGA AGCGAAGCCG TACCTGTCGT TCAAGTTCAA CCCGGCGAAG
GTGCCCGGCC TGCCCGAGCC GAAGCCGATG TTCGAGATCT GGGTGTATTC GCCGCGCGTC
GAGGGCGTGC ACCTGCGCGG CGGGCGCGTC GCGCGCGGCG GGCTGCGCTG GTCCGACCGC
CGCGAGGATT TCCGCACCGA GGTGCTCGGG CTGATGAAGG CGCAGATGGT GAAGAACGTC
GTGATCGTGC CGGTCGGCTC GAAAGGCGGC TTCGTCGTGA AGAACCCGCC GCCGCCGAGC
GATCGCGAAG CGTGGATGCG GGAAGGCATC GCGTGCTATC AGACGTTCCT GCGCGGGCTG
CTCGACCTGA CCGACAATCT CGCCGGCAAC ACGATCGTGC CGCCGCCCGA CGTGGTGCGG
CACGATCCCG ACGATCCGTA TCTCGTCGTG GCGGCCGACA AGGGCACGGC CACCTTCTCC
GATTACGCGA ACGCGATCTC GCACGAATAC GGCTTCTGGC TCGACGATGC GTTCGCGTCC
GGCGGCTCGG TCGGCTACGA CCACAAGAAG ATGGCGATCA CCGCGCGCGG CGCATGGGAA
TCGGTGAAGC GGCACTTCCG CGAGATGGGC ATCGATACGC AGACGACCGA CTTCACCGTG
GTCGGCGTCG GCGACATGTC GGGCGACGTG TTCGGCAACG GGATGCTGCT GTCGCCGCAT
ATCCGGCTCG TCGCGGCCTT CGATCACCGC CACGTGTTCC TCGATCCGAA CCCCGACCCG
GCGACGAGCT TCGCGGAGCG CGAGCGGATG TTCGCGCTCG AACGCTCGAG CTGGGCCGAC
TACGACACCT CCGTGATCTC GCAGGGCGGC GGCGTGTATC CGCGCACCGC GAAGACGATC
CCGCTGTCGC CGGCCGTGCA GGCCGCGCTC GGCATCGACG CGCATGCGCT GCCGCCGACC
GAGCTGATCC GCGCGATCCT GCAGGCGCCG GTCGACCTGC TGTACAACGG CGGCATCGGC
ACCTACGTGA AGGCCGCGCA CGAAACCCAC CAGCAGGTCG GCGACCGGGC GAACGACGCC
GTGCGCGTGA ACGGCGCGGA CCTGCGCTGC AAGGTGGTCG GCGAAGGCGG CAACCTCGGC
TGCACGCAGT TCGGCCGCAT CGAGTTCGCG CAGCGCGGCG GGCGCATCAA CACCGATGCG
ATAGACAACT CGGCCGGCGT CGATTGTTCG GATCACGAAG TCAACATCAA GATCCTGCTC
GGCCTCGTCG TCACCGACGG CGAGATGACC GAGAAGCAGC GCAACGCCCT GCTCGCGGAA
ATGACCGACG AAGTCGGGCT GCTGGTGCTG CGCGACAACT ACTACCAGAC GCAGGCGCTG
TCGATCGCGG GCCGCTACAG CGTCGAGCTG CTCGACGCCG AGGCGCGGCT GATGCGCTGG
CTCGAACGCG CGGGCCGCCT GAACCGCGTG ATCGAGTTCC TGCCGACCGA CGACGAGATC
GCCGAACGGC AAACCGCGAA ACAGGGCCTG ACGTCGCCGG AGCGCGCGGT GCTGCTCGCG
TACAGCAAGA TGTGGCTGTA CGACGCGCTG CTCGACTCCG ACGTACCGGA GGATCCGCTC
GTCGCCGCGA TGCTCGTCGA CTATTTCCCG ACGCCGCTGC AACAGCGCTT CAACGAACCG
ATGCAGCGCC ACCCGCTGCG GCGCGAGATT CTCGCGACGC ACCTGACCAA CGCGCTCGTC
AACCGCGTCG GCTGCGCGTT CGTGCACCGG CTGATGGAGG AAACCGACGC GAAGCCGGGC
GACATCGTGC GCGCGTGCAT CATGGCGCGC GACGTGTTCG ATCTCGATGC GGTGTGGCGC
GACATCGACG CGCTCGACAA CCGCGTCGCC GACGACGTGC AGGCGCGCAT GTTCGTCGAC
GTCGCACGGC TGCTGGAGCG CGCGGCGCTG TGGTTCCTGC GGCAGCTGCA ATCGGGCGCG
GTCGCCAACG GCGGCGTCGC CGGCTTGATC GCGCGCTGCC GCGACGCGGT GCAGCGCCTC
GCGCCGCAAT TGCCGTCGCT GCTGCCGACG AGCGATCTCG AAGCATTGTC GGAGCGGCAG
CGCGTGTTGG TGGACGCCGG CGTCGACAGC GCACTCGCCG GGCGCGTCGC GAACGGCGAC
ATCTCGGCCG CGCTGCTCGA CATCGCCGAA GTGGCCGCGA CCTGCGATCG CAGCCTCGAG
CTGGTCGCGG GCGTGTACTT CTCGCTCGGC ACGCTGCTGA ACTACCGGTG GATCGGCGAA
CGCGCGGCCA CGCTGCCGGC GCCGACGCAC TGGGACATGC TGGCGCGCGC GGCCGCGCTC
GCGGAAATCG CGCGGCTCAA GCGCACGCTT GCCACCAGCG CGCTCGCGGA ATCGGCCGAC
TCGACGGCGC CTGAGACGAT CGTCCACGCG TGGCGCGAAC GCCGCGAAGC CGCGCTGGAG
CGCTACGAGC ACCTGCTCGC CGATCTGCGC GCGTCGGGTG GCGCAAGCCT CGCGGTGCTG
CTCGTGATCG TGCGCGAGAT GGCCGTGCTG GAACGCGCGT GA
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| Protein sequence | MEAKNEEVVA HLLSDVVEFA RGRLPEATFR IVEPFLRHYY DFVDADDLQD RSIADLYGAA
MAHWQTAQKF VPGSERLRVY NPILEQHGWH SDHTVIEIVN DDMPFLVDSV TMAVNRLGLA
LHSALHPVFR IWRGGNGGIE RVDAGGATAP DGQSQLASFI HFEVDRCGDA ALLDTLRDDI
ARVLGDVRAS VEDWPKIVDI ARATIKDMKA RESTAEDIEA RAFLEWMAAD HFTFLGQRDY
SLVSDASGFG LRGVEGSGFG LLRESLRPSG APDVTPLPPA AAEIITGPWP IFLTKANSRA
TVHRPGYLDY VGVKLVGADG KVTGERRFIG LYTSTAYMVS SAEIPIVRRK CANIVRRAGF
LPKGHLGKSL VTVLETYPRD ELFQADEDQL YDIALGILRL QEHQRTRLFV RRDRFDRFVS
CLAFVPRDKY NTDLRRRIAK LLVDAYNGVN VEFTPLLSES AIARIHFVVH AEPGTMPDVD
TRELEARLVQ VARRWQDDLA DALLDAFGEE QGNRLLQRYA ESFPAGYRDD YPARTAVRDI
ELIERVKESG QLAMNLYRPI EAGPRAFRFK VYRAGDPIAL SRSLPMLEHL GVRVDEERPY
RIQTQDAAPA WVHDFGLELA DDTEFDIERV KGLFEDAFDR IWSGRIENDD FNRLVLRAHL
SAREVTILRA YAKYLRQVGS TFSDAYIERA LTGNPAIARQ LVELFLLRFD PAIGGTRDVQ
AEHLLKAIET ALDQVPNLDE DRILRQFLGV INATERTNYF LHDANGEAKP YLSFKFNPAK
VPGLPEPKPM FEIWVYSPRV EGVHLRGGRV ARGGLRWSDR REDFRTEVLG LMKAQMVKNV
VIVPVGSKGG FVVKNPPPPS DREAWMREGI ACYQTFLRGL LDLTDNLAGN TIVPPPDVVR
HDPDDPYLVV AADKGTATFS DYANAISHEY GFWLDDAFAS GGSVGYDHKK MAITARGAWE
SVKRHFREMG IDTQTTDFTV VGVGDMSGDV FGNGMLLSPH IRLVAAFDHR HVFLDPNPDP
ATSFAERERM FALERSSWAD YDTSVISQGG GVYPRTAKTI PLSPAVQAAL GIDAHALPPT
ELIRAILQAP VDLLYNGGIG TYVKAAHETH QQVGDRANDA VRVNGADLRC KVVGEGGNLG
CTQFGRIEFA QRGGRINTDA IDNSAGVDCS DHEVNIKILL GLVVTDGEMT EKQRNALLAE
MTDEVGLLVL RDNYYQTQAL SIAGRYSVEL LDAEARLMRW LERAGRLNRV IEFLPTDDEI
AERQTAKQGL TSPERAVLLA YSKMWLYDAL LDSDVPEDPL VAAMLVDYFP TPLQQRFNEP
MQRHPLRREI LATHLTNALV NRVGCAFVHR LMEETDAKPG DIVRACIMAR DVFDLDAVWR
DIDALDNRVA DDVQARMFVD VARLLERAAL WFLRQLQSGA VANGGVAGLI ARCRDAVQRL
APQLPSLLPT SDLEALSERQ RVLVDAGVDS ALAGRVANGD ISAALLDIAE VAATCDRSLE
LVAGVYFSLG TLLNYRWIGE RAATLPAPTH WDMLARAAAL AEIARLKRTL ATSALAESAD
STAPETIVHA WRERREAALE RYEHLLADLR ASGGASLAVL LVIVREMAVL ERA
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