| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4537 |
|---|
| Symbol | |
|---|
| ID | 6180436 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010552 |
|---|
| Strand | + |
|---|
| Start bp | 1640726 |
|---|
| End bp | 1641982 |
|---|
| Gene Length | 1257 bp |
|---|
| Protein Length | 418 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641684298 |
|---|
| Product | arginine deiminase |
|---|
| Protein accession | YP_001811209 |
|---|
| Protein GI | 172063558 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2235] Arginine deiminase |
|---|
| TIGRFAM ID | [TIGR01078] arginine deiminase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.130916 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.352643 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCATG TCACGCCTCA AGTCGGTGTC CACTCCGAAG TCGGCAAGCT GCGCAAGGTG
ATCGTCTGCT CGCCGGGGCT CGCCCATCAT CGCCTCACGC CCAGCAATTG CAACGAATTG
CTGTTCGACG ACGTGATGTG GGTGAACCAG GCCAAGCGCG ACCATTTCGA CTTCGTATCG
AAGATGCGCG AGCGCGGCGT CGAGGTGCTC GAGATGCACA ATCTGCTGAC CGACACCGTC
GCGAACCCGG CCGCACGCAC GTGGATTCTC GATCGCAAGA TCACGTCCGA CACCGTCGGC
ATCGGTCTCG TCGACGAAGT GCGCGCATGG CTCGACGGCC TTGCACCGCG CACGCTCGCC
GAATTCCTGA TCGGCGGCGT CGCGGCGAGC GACGTGCCGG GCGGCAGCCA GTCGAAGGCG
CTCACGTTGT TTCGCGATTA CCTCGGGCGG TCGTCGTTCG TGCTGCCGCC GCTGCCGAAC
ATGATGTTTA CGCGCGACAC GTCGTGCTGG ATCTACGGCG GCGTCACGCT GAATCCGATG
CACTGGCCGG CCCGCCGGCA GGAAACGCTG CTCGTCGCCG CGGTCTACCG GTTCCATCCC
CAGTTCGCCG ACGAGACATT CGACGTGTGG TACGGCGATC CCGACCGCGA CCACGGGATG
GCGACGCTCG AAGGCGGCGA CGTGATGCCG ATCGGTCGCG GCGTCGTGCT CGTCGGGATG
GGCGAACGCA CCACGCACCA GGCGATCGGC CAGCTCGCGC AGTCGCTGTT CGCGAAGGGC
GCGGCCGAAC GCGTGATCGT CGCGGGCCTG CCGAACTCGC GTGCGTCGAT GCATCTCGAC
ACCGTGTTCA GTTTTTGCGA TCGCGATCTC GTGACCGTAT TCCCCGACGT CGTGAACCGC
ATCGTCCCGT TCACGTTGCG CCCGCGCGAC GACGCGCGCA ACGGCATCGA CATCGAGCGG
GAAGACAAGG CGTTCGTCGA CGTCGTCGCG CAGGCGCTGG GTCTGAAATC GCTGCGCGTC
GTCGAGACGG GCGGCAACGA TTTCGCGGCC GAACGCGAAC AATGGGACGA CGGCAACAAC
ATGATCTGCC TCGAACCGGG CACCGTCGTC GGCTACGACC GCAATACCTA TACAAACACG
CAGTTGCGCA AGGCGGGGGT CGAGGTGATC ACGATCGGCT CCAGCGAGCT CGGCCGCGGG
CGCGGCGGCG GCCATTGCAT GACCTGTCCG GTCCTGCGCG ATCCGGTCGA TTTCTGA
|
|---|
| Protein sequence | MTHVTPQVGV HSEVGKLRKV IVCSPGLAHH RLTPSNCNEL LFDDVMWVNQ AKRDHFDFVS
KMRERGVEVL EMHNLLTDTV ANPAARTWIL DRKITSDTVG IGLVDEVRAW LDGLAPRTLA
EFLIGGVAAS DVPGGSQSKA LTLFRDYLGR SSFVLPPLPN MMFTRDTSCW IYGGVTLNPM
HWPARRQETL LVAAVYRFHP QFADETFDVW YGDPDRDHGM ATLEGGDVMP IGRGVVLVGM
GERTTHQAIG QLAQSLFAKG AAERVIVAGL PNSRASMHLD TVFSFCDRDL VTVFPDVVNR
IVPFTLRPRD DARNGIDIER EDKAFVDVVA QALGLKSLRV VETGGNDFAA EREQWDDGNN
MICLEPGTVV GYDRNTYTNT QLRKAGVEVI TIGSSELGRG RGGGHCMTCP VLRDPVDF
|
|---|
| |